Gene Information

Name : smpB (Cspa_c51000)
Accession : YP_007458105.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Unknown
Product : SsrA-binding protein SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5635886 - 5636353 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence :
ATGGCAAGAAAAAAGAATGAAAATTCATTAGCAGAAAATAGAAAAGCAAGACATGATTATTTTGTAGAAGAAGCAATGGA
AGCAGGATTAGTTTTAGTAGGAACTGAAGTTAAGTCCATAAGAAATGGAAGAGTTAATCTTAAAGATTGTTATGCAGATG
TATACAATGGAGAAATATTTATTAAAAATATGCATATTTCACCATATGAACAAGGTAATATTTTCAATGTAGATCCATTA
AGAGAAAGAAAATTATTACTTCATAGAGATCAAATAAGAAGGCTTGATGCTTTAGTATCGCAAGATGGATATACCTTAGT
ACCATTATCTCTATATTTAAAAGAAGGTAAAGTAAAAGTTGCTCTTGGAGTTTGTAAAGGTAAAAAGAATTATGATAAGA
GAGATGCTATGCTTGAAAAAGCACATAAGAGAGACATAGATAGAGCAATAAAAGAAAAATATAAATAG

Protein sequence :
MARKKNENSLAENRKARHDYFVEEAMEAGLVLVGTEVKSIRNGRVNLKDCYADVYNGEIFIKNMHISPYEQGNIFNVDPL
RERKLLLHRDQIRRLDALVSQDGYTLVPLSLYLKEGKVKVALGVCKGKKNYDKRDAMLEKAHKRDIDRAIKEKYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 9e-41 63
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 7e-26 44
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 7e-29 43