Gene Information

Name : Cspa_c50860 (Cspa_c50860)
Accession : YP_007458091.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Unknown
Product : ABC-type multidrug transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5619112 - 5620128 bp
Length : 1017 bp
Strand : +
Note : -

DNA sequence :
TTGAGAATAAAAGCAATTATGATTAGAATTTTGCTTCAGCTAGCCCATGATAAACGTACTATAGCTTTAATGATTCTTGC
ACCAATATTAGTACTAACATTAATGTCATTTATTTTTGATGGGTCTGATTATCATCCAAAAATCGGAATAATTAATGCTC
CTCTTAAATTTGTAAATAAGTTAGAGGATAATGACGCAAATGTTATAAGATATGATGAAAGCTCTGCTCATGCTGTTCTC
GAAGCTTCAGAAATTGATGCTTTAATTAATTTTGAAAATGGAATTCCAAAAATAACCTTGGAAGGTAGTGACCCAAGTAA
AAGTCAGGCTGTTCTTAAACTTACTCAAAATGCACTTTCTACAACAGGTTCTTCTGCAAAACCTGATATAACGTATTTGT
ATGGTTATGAAAATATGTCTTCCTTTGATAACTTTGGCCCTATACTTATTGGCTTTTTTGTATTCTTTTTTGTTTTTCTA
GTAGCTGGGGTTGCCTTTCTTGGTGAAAGAAAATCCGGAACCCTTGAAAGAATACTTGCTACTCCTTTACGAAGATGGGA
AATAGTTATAGGATACATACTTGGCTTTGGTGTTTTTACTATAATTCAATCTACACTTATCGCATGGTTTTCAATTAATA
TTCTTAATATTATGATGATTGGTTCCTTCACACTTGTAATTCTAATTACAATATTAACCGCACTAGTGGCTCTTTCTATA
GGAACCTTTATATCTGCCTTTGCTAATAATGAACTGCAAATGATTCAATTTATTCCAATAATTGTAGTACCACAAGTTTT
TTTCTCAGGTCTTTTTGATTTGAGCACAATGGCACCTTGGCTTCAATCTTTTGGACGATTTATGCCTCTGTGGTATTCTG
CTGATGCTCTTAGAAATGTTATGATTAGAGGCAAAGGTTGGAATGATATAGTGTTTGATGTAATAATTCTAATTTTTATT
TGCGTATTATTTATATTTGCAAATATAGTTGCTCTTAAAAAATACCGTAAAATATGA

Protein sequence :
MRIKAIMIRILLQLAHDKRTIALMILAPILVLTLMSFIFDGSDYHPKIGIINAPLKFVNKLEDNDANVIRYDESSAHAVL
EASEIDALINFENGIPKITLEGSDPSKSQAVLKLTQNALSTTGSSAKPDITYLYGYENMSSFDNFGPILIGFFVFFFVFL
VAGVAFLGERKSGTLERILATPLRRWEIVIGYILGFGVFTIIQSTLIAWFSINILNIMMIGSFTLVILITILTALVALSI
GTFISAFANNELQMIQFIPIIVVPQVFFSGLFDLSTMAPWLQSFGRFMPLWYSADALRNVMIRGKGWNDIVFDVIILIFI
CVLFIFANIVALKKYRKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2614 YP_254529.1 hypothetical protein Not tested ¥ðSh2 Protein 1e-38 44
SE0095 NP_763650.1 hypothetical protein Not tested SCCpbp4 Protein 2e-31 44
SH0082 YP_251997.1 hypothetical protein Not tested SCCmec Protein 5e-32 44