Gene Information

Name : Cspa_c44370 (Cspa_c44370)
Accession : YP_007457444.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4841110 - 4841808 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :

ATGTTTTTGAAAGTTATGGATGCTCAAAAAGCATATGGAGAAGGTGAAAGTAAGGTTCAAGTACTAAAAGGGGCAACTTT
TACTTTAGAAGAAAGTAAAATATGCACTATTCTAGGTCCATCTGGCTCAGGGAAATCAACTTTATTAAATGTTATTGGAG
GATTAGAGGGGATAGATGTAGGTGAAGTGAATATAGATAACATTTTGGTTTCTAGTCTTAATTCTGAGGAATTAGCGGCT
TATAGAAGAGAAAAATTAGGATTTATATTTCAATTTTATAATCTAATACCTAATCTTACAGTTAAAGAAAATATTGAAGT
GTGTGAATATCTTACAGATGATCCTTTAAATAAAGAAGAATTATTAGCAAGTTTGGGCTTATTAGAACATCAGGATAAAT
TTCCAAGGCATTTATCAGGGGGGCAACAGCAAAGAACAGCTATAGCAAGAGCACTTATTAAAAACCCTAAACTGTTACTT
TGTGATGAACCAACTGGTGCTTTAGATTATAAGACGTCAAAGGAAATACTTGAACTTTTAGAATCAGTTAATGAAAGGTA
TGGTACGACTATGATTATAGTAACTCATAATGATGCCATTAAGTATATGTCTCATAAAGTTGTAAAAGTTAGAGACGGAC
GAATTGAAGAAGAATATGAAAATGATACTATAATGAAAGCCAAGGATATTACATGGTAG

Protein sequence :

MFLKVMDAQKAYGEGESKVQVLKGATFTLEESKICTILGPSGSGKSTLLNVIGGLEGIDVGEVNIDNILVSSLNSEELAA
YRREKLGFIFQFYNLIPNLTVKENIEVCEYLTDDPLNKEELLASLGLLEHQDKFPRHLSGGQQQRTAIARALIKNPKLLL
CDEPTGALDYKTSKEILELLESVNERYGTTMIIVTHNDAIKYMSHKVVKVRDGRIEEEYENDTIMKAKDITW

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-31	42
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-32	42
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	2e-32	42
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-32	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Cspa_c44370	YP_007457444.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	7e-47	45
Cspa_c44370	YP_007457444.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	2e-39	44
Cspa_c44370	YP_007457444.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	1e-31	41