Gene Information

Name : catB (Cspa_c34740)
Accession : YP_007456489.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase CatB
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.1.28
Position : 3763233 - 3763892 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGAATTTTAATTTAATAGATATTAATCATTGGAGTAGAAAGCCATACTTTGAACACTATTTAAACACTGTGAAATGTAC
TTATAGTATGACTGCCAATATAGAGATAACTGATTTATTGTATGAAATTAAACTTAAAAATATTAAATTTTATCCTACAC
TTATTTATATGATTGCAACTGTGGTTAATAATCATAAAGAATTCCGTATTTGTTTTGACCATAAAGGTAGTTTAGGATAT
TGGGATAGCATGAATCCAAGCTATACTATTTTTTATAAAGAAAACGAAACATTTTCAAGTATTTGGACGGAATATAACGA
AAGTTTTTTACGTTTTTATAGTGATTATATTGATGATATAAAAAACTATGGAAATATCATGAAGTTTACTCCGAAATCAA
ATGAACCTGACAATATATTTCCGGTATCAAGTATTCCTTGGGTGAGTTTTACAGGGTTTAATTTGAATGTATATAATGAA
GGAACATATTTAATTCCTATTTTTACTGCAGGAAAATATTTCAAACAAGAAAATAAAATATTTATTCCTATATCAATACA
AGTACATCATGCTGTTTGTGACGGTTATCATGCTAGTAGATTTATTAATGAAATGCAAGAATTAGCATTTAGTTTTCAAG
AATGGTTAGAAAATAAATAA

Protein sequence : 
MNFNLIDINHWSRKPYFEHYLNTVKCTYSMTANIEITDLLYEIKLKNIKFYPTLIYMIATVVNNHKEFRICFDHKGSLGY
WDSMNPSYTIFYKENETFSSIWTEYNESFLRFYSDYIDDIKNYGNIMKFTPKSNEPDNIFPVSSIPWVSFTGFNLNVYNE
GTYLIPIFTAGKYFKQENKIFIPISIQVHHAVCDGYHASRFINEMQELAFSFQEWLENK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cat YP_006098370.1 chloramphenicol acetyltransferase Not tested Tn2411 Protein 7e-45 44
cat AAL08441.1 chloramphenicol acetyltransferase Not tested SRL Protein 2e-44 44
cat CAJ77070.1 Chloramphenicol acetyltransferase Not tested AbaR1 Protein 5e-45 44
catA2 ACF06176.1 chloramphenicol acetyltransferase II Not tested Tn5036-like Protein 5e-43 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
catB YP_007456489.1 chloramphenicol acetyltransferase CatB CP001581.1.gene2168. Protein 6e-66 60
catB YP_007456489.1 chloramphenicol acetyltransferase CatB NC_010427.6155852.p0 Protein 3e-46 48
catB YP_007456489.1 chloramphenicol acetyltransferase CatB NC_010426.6155849.p0 Protein 3e-46 48
catB YP_007456489.1 chloramphenicol acetyltransferase CatB NC_010111.5787932.p0 Protein 3e-50 47
catB YP_007456489.1 chloramphenicol acetyltransferase CatB CP004022.1.gene799.p Protein 3e-46 46
catB YP_007456489.1 chloramphenicol acetyltransferase CatB NC_010558.1.6276004. Protein 3e-45 44
catB YP_007456489.1 chloramphenicol acetyltransferase CatB NC_010410.6002590.p0 Protein 3e-45 44
catB YP_007456489.1 chloramphenicol acetyltransferase CatB NC_011586.7045194.p0 Protein 3e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
catB YP_007456489.1 chloramphenicol acetyltransferase CatB VFG1032 Protein 1e-44 44