Gene Information

Name : Cspa_c02910 (Cspa_c02910)
Accession : YP_007453363.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 298309 - 299055 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence :
GTGATTTATTTGAATAAAACTATAATAGAAATGAAAAATATAGTTAAAAGCTTTTATGTGGGTACTCCAAACCAATTGGA
TATTTTAAAAGGGATTAATATAGTTGTAAATGAAGGTGAATTTGTAGCTATTGTTGGAGCTTCTGGTTCTGGAAAAAGTA
CATTGATGAACATAATAGGGGCACTTGATAGGCCAACTTCAGGAAAATATATTTTAGATGGTACAGATATTGAGGATAAA
ACTGACAATGGTTTATCAGAGGTAAGAAACAAAAAGATAGGCTTTGTATTTCAAACCTATAATTTAATACCAAGAAGCTC
AGCTTTAAAAAATGTTGAATTACCAATGCTTTATTATGGAATGAATAGACATGAAAGAAGGGAACGGGCAGAACAACTGT
TAGAACTTGTGGGAATGAAGGATAGAATGAAACATCAACCTAATGAATTATCAGGAGGTCAGAAGCAAAGGGTTGCTATA
GCTAGAGCTCTTGCTAATAATCCAAGTATTATACTTGCTGATGAACCCACAGGGGCCCTTGATTCAGAAACAGGAAGACT
TGTTATGGATTTGTTTCATAAGGTACATGAAGTAGAAGGGAAAACTATAGTATTTATAACTCATAATCATGAGCTTGCAG
AAGAAACAGAAAGAATTATAACATTGAAGGATGGAAATGTAGTATCAGAAGAGCAGAATGACAAGTTTATTAAAAAATTT
CCAAATGGTGAAAAAATATGTTTATAA

Protein sequence :
MIYLNKTIIEMKNIVKSFYVGTPNQLDILKGINIVVNEGEFVAIVGASGSGKSTLMNIIGALDRPTSGKYILDGTDIEDK
TDNGLSEVRNKKIGFVFQTYNLIPRSSALKNVELPMLYYGMNRHERRERAEQLLELVGMKDRMKHQPNELSGGQKQRVAI
ARALANNPSIILADEPTGALDSETGRLVMDLFHKVHEVEGKTIVFITHNHELAEETERIITLKDGNVVSEEQNDKFIKKF
PNGEKICL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cspa_c02910 YP_007453363.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 9e-49 55
Cspa_c02910 YP_007453363.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-36 47
Cspa_c02910 YP_007453363.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 4e-37 43
Cspa_c02910 YP_007453363.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 7e-38 42