Gene Information

Name : arlR (Cspa_c19070)
Accession : YP_007454931.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Virulence
Product : response regulator ArlR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2106332 - 2107003 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGATATTATTTGCTGAAGACGATATTAGATTAGGTAAACTAATTACTCATATGCTAAAAAAAGAAAGTAAATATCA
CGCAGAATGGGTCAACAATGGAAATGAAGCCTTGTTCTTGGCTTCTAATTTTCACTATGATTTGATAATATTGGATTGGA
TGATGCCAGAGATGGATGGAATAACCGTTTGTAGAAAATTACGTGAAAAGGAATATAATGGAGCAATACTAATTTTGACT
GCGAAAGATTTTGTATCAGACAAAGTAGAGGGATTGGATGCAGGTGCTGACGATTTTCTTGTGAAGCCTTTTGAATTTGA
AGAGTTGTTTGCGCGTATTCGAGCATTGTCAAGAAGAGGCACTCAGCAAATTAAAGCTGATATTATACAATACAAAGATA
TTTTATTAAATAGAACTACTTTCATATTACAAATAAGGGGAAAAGAAATTCAACTTACACCAACGGAATTTCAACTGTTA
GACTTATTAATTATAAATCAAGGCTGCGCATTAACCAGAGAAGTAATCCATGATAGGGTATGGGGATATGAATCTGATGT
GAATTATAATACAATAGATGCATTTATACGTATCCTGAGGAAAAAGATTGATGATGCAGGTTATCCGTCTTTGATAAAGA
GTATTCGAGGGGTAGGTTATAGGATTGAATAA

Protein sequence : 
MKILFAEDDIRLGKLITHMLKKESKYHAEWVNNGNEALFLASNFHYDLIILDWMMPEMDGITVCRKLREKEYNGAILILT
AKDFVSDKVEGLDAGADDFLVKPFEFEELFARIRALSRRGTQQIKADIIQYKDILLNRTTFILQIRGKEIQLTPTEFQLL
DLLIINQGCALTREVIHDRVWGYESDVNYNTIDAFIRILRKKIDDAGYPSLIKSIRGVGYRIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arlR YP_007454931.1 response regulator ArlR BAC0308 Protein 8e-34 44
arlR YP_007454931.1 response regulator ArlR NC_003923.1003417.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR NC_013450.8614146.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR NC_002951.3238224.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR NC_007793.3914065.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR NC_002758.1121390.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR NC_010079.5776364.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR NC_002952.2859858.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR NC_007622.3794948.p0 Protein 1e-38 43
arlR YP_007454931.1 response regulator ArlR BAC0083 Protein 7e-33 43
arlR YP_007454931.1 response regulator ArlR BAC0197 Protein 2e-32 43
arlR YP_007454931.1 response regulator ArlR AE015929.1.gene1106. Protein 3e-33 42
arlR YP_007454931.1 response regulator ArlR BAC0125 Protein 1e-29 41
arlR YP_007454931.1 response regulator ArlR BAC0638 Protein 2e-26 41
arlR YP_007454931.1 response regulator ArlR HE999704.1.gene1528. Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arlR YP_007454931.1 response regulator ArlR VFG0596 Protein 3e-29 42
arlR YP_007454931.1 response regulator ArlR VFG1390 Protein 6e-37 41