|
Name : Cspa_c18740 (Cspa_c18740) Accession : YP_007454898.1 Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT) Genome accession: NC_020291 Putative virulence/resistance : Resistance Product : small GTP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2074942 - 2076900 bp Length : 1959 bp Strand : + Note : - DNA sequence : ATGAAGAAAATAATTAATATAGGAATCGTTGCACATGTAGATGCTGGAAAAACAACTATAACAGAGAATTTATTATATTA TAGCGGGGCTATAAAAGCGGTCGGAAGGGTTGATTTAGGTAATACACAGACAGACTCTATGGAGCTTGAACGTAAGAGAG GAATTACTATTAAATCGTCAACTGTATCTTTCACTTGGAATGATGTTAAAGTAAATATTATTGACACTCCAGGACATGTA GATTTTATTTCAGAAGTTGAACGCTCATTAAGTGTTTTAGATGGAGCAATAATAGTTATATCAGGAGTAGAAGGGATTCA GTCGCAAACAAGAATATTATTTAATACGTTAAAGAAGTTAAATATTCCAACAATAATTTTTATAAACAAGTTGGATAGAA TTGGGGCAAATTCTAATAAAGTATTAAAAGAGATAAAAAAGAATATGTCTAGTAAAGTGGTTAGATTACAAAAGGTATAC GACGAAGGAAGTAAAGAGGTTTATATAAAAAATCTACACGATATATGTATGATGAATGATGATGTTATTAATGTTTTATC AGATTTAGACGAAGCATTTCTAGAAAAATATATTAGTGGAATGGAGATTGATAAAAGAGAAATACAAGAAAAACTTTCAT TATATGCAAGGGAAGGAAAGCTATATCCAGTATTTTGTGGCGCTGCAGCAATTGGACTCGGAATTGAAGATTTATTAGAA GGAATTTGCAGTTATCTCCCATTTGCAGGAGATGATTGTGTAAGGGATTTATCAGGAGTGGTTTTTAAAATTGAAAGAAC AAGCACTAATGAAAAGAAGGTTTATGTAAGATTATTTAATGGAAAAATATCAGTAAGAGATAAAATTCAAATGCCTAATA AGGAGACAGTAGAAAAGGTAAAGAAAATTAATAGGTTAGAAAATGGGAAAATTACTGAGGCGCAGAGTATAAAAGCAGGG GATATAGGTATTTTATATGGACTTGCAAGCTTTCAAGTTGGAGATGTAATCGGAATTTCAAATAATAAAGTTAAAAATAT ATCTATGGCTAAACCAACATTAAAAACAACTATTTCTGCAATTGATAAAGAAAAAAATCCTGAGCTATTTAGGGCACTAA CATTTCTTTCAGAGGAAGATCCATTATTAGAATTAGAGATGAACGATTTAGATAAAGAAATTCATGTTAATTTATTTGGT GAAGTTCAAATGGAAATACTGAGTGCTATAATAGATGATTTCTATGGAATAAAAGTAGAGTTTTCAAATATTCAAACCAT TTATAAGGAAGCACCTAAAGGTGTTGGAACATCAATAATACATATTAAGGAAGAAGCAAATCCTTTTTATGCAACGGTAG GTTTGAAGATAGAGCCTTTGGGAAGAGGTGAAGGACTTAAGTATATTTCTAATGTTTCAGTAGGTTCACTGCCAAAATCT TTTCAAAATGCAATTGAGGAAGCAGTTATTAAGACTAGCAAACAAGGACTTTTTGGATGGGAGGTTACGGATGCTAAAGT TACACTTACCTGTGGTGAATTTTTTAGCCCAGTCAGCACGCCAGCAGATTTTAGGAATGTGACACCTATGGTATTTATGG AAGCCTTATATAAGGCACAAACTGTTTTGTTAGAACCATTACATGAGTTTGAATTAAGAATTCCTCAAAATGTTTTAAGT AAAGCGATTTGGGATTTGGAAACTATGAGAGCTACTTTTGATAATCCTGTTGTTATAGAGGATGAATTTTCAATAAAAGG ATTGATTCCAGTAGAAAACTCAAAAGAATATAAAATGAAAATAGCTTCATATACACAAGGCAAAGGAATGTTTGTGACAA AATTTTATGGGTATAATGAAGTTCCAGCTGAATTTGGAAAGGTAAACCCAAGAACAACGTATGATCCATTGAATAAAAAA GAGTATCTTCTTCATAAATTAAACGCAATTAGGGATTAA Protein sequence : MKKIINIGIVAHVDAGKTTITENLLYYSGAIKAVGRVDLGNTQTDSMELERKRGITIKSSTVSFTWNDVKVNIIDTPGHV DFISEVERSLSVLDGAIIVISGVEGIQSQTRILFNTLKKLNIPTIIFINKLDRIGANSNKVLKEIKKNMSSKVVRLQKVY DEGSKEVYIKNLHDICMMNDDVINVLSDLDEAFLEKYISGMEIDKREIQEKLSLYAREGKLYPVFCGAAAIGLGIEDLLE GICSYLPFAGDDCVRDLSGVVFKIERTSTNEKKVYVRLFNGKISVRDKIQMPNKETVEKVKKINRLENGKITEAQSIKAG DIGILYGLASFQVGDVIGISNNKVKNISMAKPTLKTTISAIDKEKNPELFRALTFLSEEDPLLELEMNDLDKEIHVNLFG EVQMEILSAIIDDFYGIKVEFSNIQTIYKEAPKGVGTSIIHIKEEANPFYATVGLKIEPLGRGEGLKYISNVSVGSLPKS FQNAIEEAVIKTSKQGLFGWEVTDAKVTLTCGEFFSPVSTPADFRNVTPMVFMEALYKAQTVLLEPLHEFELRIPQNVLS KAIWDLETMRATFDNPVVIEDEFSIKGLIPVENSKEYKMKIASYTQGKGMFVTKFYGYNEVPAEFGKVNPRTTYDPLNKK EYLLHKLNAIRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetO | AFJ97266.1 | truncated tetracycline resistant protein | Not tested | Not named | Protein | 9e-68 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cspa_c18740 | YP_007454898.1 | small GTP-binding protein | L20800.gene.p01 | Protein | 0.0 | 86 |
| Cspa_c18740 | YP_007454898.1 | small GTP-binding protein | L42544.gene.p01 | Protein | 4e-123 | 46 |
| Cspa_c18740 | YP_007454898.1 | small GTP-binding protein | FN594949.1.gene24.p0 | Protein | 6e-102 | 42 |
| Cspa_c18740 | YP_007454898.1 | small GTP-binding protein | AJ295238.gene.p01 | Protein | 3e-105 | 41 |
| Cspa_c18740 | YP_007454898.1 | small GTP-binding protein | Z21523.gene.p01 | Protein | 2e-112 | 41 |
