Gene Information

Name : pebC (Cspa_c16180)
Accession : YP_007454642.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein PepC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1785459 - 1786181 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAAATTAGATAATATAGTTAAAAATTTTGGGGATGTTCATGTATTGAAGAATGTTAGTTTAACAGTGGAGGAAGG
GGAAAAACTGGTTGTTATAGGGCCAAGTGGATCTGGTAAATCAACACTCATAAGATGTATGAACTATTTAGAAGAACCTA
CATCAGGAAAAGTTACTGTAGATGAGTGTGATTTAAGCTTAAAGAAAGAATTGGCTAAGGTGAGGCAATCAACTGCAATG
GTTTTTCAACAATTTAATTTATATCCACACATGACAGTATTAGAGAATCTAACACTGGCACCAATAAAACTTCAAAATGT
GAGTAAGAAGGATGCAGAAGAATCTGGATTGAAGTATTTAGAAAAAGTAGGACTAGAGGAAAAGGCAAATGCCTATCCAA
GTCAATTATCAGGAGGTCAGCAGCAAAGGGTAGCAATAGCAAGAGCACTTAATATGCATCCAAAGATAATGTTATTTGAT
GAGCCTACATCAGCATTAGATCCAGAAATGATTCAAGAAGTCTTGGATGTTTTAGTGGGATTATCAAAGGAAAATATAAC
AATGGTGGTTGTAACTCATGAAATGGGATTTGCAAAGCAAGTAGCAGATAGAATTGTGTTTATGGATGGAGGTCAAATAA
TAGAAGAAGGAACTCCAGATGAATTTTTTTCAAATCCAAAGAATGAAAGAGCAAGAAGTTTTTTAAACAAAGTAATAAGA
TAA

Protein sequence : 
MIKLDNIVKNFGDVHVLKNVSLTVEEGEKLVVIGPSGSGKSTLIRCMNYLEEPTSGKVTVDECDLSLKKELAKVRQSTAM
VFQQFNLYPHMTVLENLTLAPIKLQNVSKKDAEESGLKYLEKVGLEEKANAYPSQLSGGQQQRVAIARALNMHPKIMLFD
EPTSALDPEMIQEVLDVLVGLSKENITMVVVTHEMGFAKQVADRIVFMDGGQIIEEGTPDEFFSNPKNERARSFLNKVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-37 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 8e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pebC YP_007454642.1 ABC transporter ATP-binding protein PepC NC_012469.1.7686878. Protein 2e-32 44
pebC YP_007454642.1 ABC transporter ATP-binding protein PepC CP001581.1.gene598.p Protein 3e-24 43