Gene Information

Name : ribD1 (Cspa_c13620)
Accession : YP_007454388.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 1497532 - 1498620 bp
Length : 1089 bp
Strand : +
Note : -

DNA sequence :
TTGGATGAGAAATATATGGATAGAGCATTAGAATTAGCAAAGAAAGGTATTGGTAGAGTTAATCCTAATCCGTTAGTTGG
AGCAGTCATAGTTAAGGATAATGAAATAATAGGAGAAGGATATCATGAATGTTATGGAATGGCTCATGCTGAAAGAAATG
CTATAAAGAATGCAGTGAGAGATGTAGTGGGAAGTACCATTTATGTGACACTTGAACCATGTGCTCATTATGGAAAAACT
CCACCGTGTGTAGATTTGTTAATTGAAAAAAGATTTAAAAAAGTCGTGATTGGAATGTTAGATCCAAATGAACTAGTTGC
AGGAAAAAGCATAGAAAAATTGAAACAGCATGGTATTGAAGTTGTAGTTGGAATTAGAGAAGAGGAATGTAAAAAGTTAA
ATGAAATCTTTATTAAATACATTACATCAAAATTGCCATTCGTAGTACTAAAAAGTGGAATGTCCATAGATGGTAAAATA
GCAACATATAATGGCGAATCTAAATGGATAACCTCTAAAGAATCAAGAGAGGATTCGCAAAAGCTAAGAAATAGGCTACA
TTCCATTATGGTTGGAATAAATACAATTATTACTGATGATCCAGAGCTTACTTGCAGAATTAATAAAGATAAGAATTTAA
TTAGGATTATTGTAGATACTAAACTTAGAATCTCTTTAGAGTCTAAAGTGATTTTAAATAGTGATAAAAAAACAATTATT
GCAACTACTATAAATGCTGATGGAAATAAAAAACAAAAGCTAAGAGAATTAGGAATGAAAATTATAGAAGTACCAAGTAA
AAATAATAAGGTGGACTTAAAAGAGCTTATTAATAAACTTGGGCAGGAAGGCATAGATTCAATACTTATTGAAGGTGGTG
GAACACTTAATTTTTCTGCACTTGAAGAAGGTATTGTAGATAAAGTGGTTTTTTATATAGCTCCTAAAATATTGGGGGGA
ACGAATAGCAAGAGTAGCATATCAGGAAAGGGATTTTCGAAACTAAGTGAAGCAGTCAACTTAATTGATATGAGGTATAG
AACTGTAGGAAAAGATTTAGTGGTAGAAGGATATGTAGAAAAGAAGTAA

Protein sequence :
MDEKYMDRALELAKKGIGRVNPNPLVGAVIVKDNEIIGEGYHECYGMAHAERNAIKNAVRDVVGSTIYVTLEPCAHYGKT
PPCVDLLIEKRFKKVVIGMLDPNELVAGKSIEKLKQHGIEVVVGIREEECKKLNEIFIKYITSKLPFVVLKSGMSIDGKI
ATYNGESKWITSKESREDSQKLRNRLHSIMVGINTIITDDPELTCRINKDKNLIRIIVDTKLRISLESKVILNSDKKTII
ATTINADGNKKQKLRELGMKIIEVPSKNNKVDLKELINKLGQEGIDSILIEGGGTLNFSALEEGIVDKVVFYIAPKILGG
TNSKSSISGKGFSKLSEAVNLIDMRYRTVGKDLVVEGYVEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-45 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-45 41