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Name : lysS (Cspa_c01340) Accession : YP_007453217.1 Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT) Genome accession: NC_020291 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase LysS Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 141661 - 143166 bp Length : 1506 bp Strand : + Note : - DNA sequence : ATGTCAACAGAAGAAATGAGCATGCAGGAATTAGAGTCTCAATATAATGAACAAGAAGGATTGAGAAGAACTAAACTAGC AGAGCTACAAAATGCCGGAAAAGATCCTTTTGATGTATATAAAGTAAACAGAACTCATACATCAGAAGAAGTTAAGGCAA ACTATGACGAATTAGAAGGAAAAGAAGTAACAGTTGCAGGAAGACTAATGTCTAAAAGAGGTCAAGGGAAAGTTGTATTT TCAGATATACACGATAAAGATGGAAAGATACAATTATTCTTAAAGATTGATAAAGTTGGAGAAGAGAATTTAAAGCAATA CAAGGCATTTGATCTAGGTGACTGGGTTGCAGCGACAGGTGAAGTGTTTACAACAAAAACAGGGGAAGTATCTGTAAATG TAAATACTTTTGAATTAACATGTAAATCTTTAAAGCCACTTCCAGAAAAATGGCATGGATTAAAAGATCCAGATTTAAGA TATAGACAAAGAGAAGTTGATATAATTACAAATGCAGAAGTAAAAGAAACTTTTATAAAGAGAAGTAAAATTATTTCAGC TATGAGAGAATTTTTAGATAATAAAGGTTTTGTAGAAGTAGAAACTCCAATACTTGGAGCTATAGCTGGTGGAGCAGCGG CTAGACCGTTTGTCACTCATCACAATACTTTAGATATTGATATGTACTTAAGAATTGCAACAGAGTTATATCTTAAGAGA TTGATAGTTGCTGGTTTTGAAAAAGTATATGAAATAGGAAGAAATTTTAGAAACGAAGGTATGTCGGTTAGACATAATCC TGAATTTACAGCAATTGAATTATATGAAGCATATTCGGATTATAATGATATGATGGAAATTACAGAAAATATGGTTGCGC ATATATGTGAAAAGGTAAATGGAACTACTAAAGTTAATTATCAAGGAACTGAAATAGATTTCAAGCCACCTTGGAGAAGA ATAACTATGGTGGATGCAGTAAAAGAATATGCGGGAGTAGATTTTAATCAAATTAAATCCGATGAAGAAGCTCAAGCTAT AGCTAAAGAAAAGCATTTAGAATTTGCTAAACCATTAGATACAGTAACTAAAGGTGAAGTATTAAATATGTTATATGAAG AATTTGGTGAAGCTAATATGATTCAGCCTACATTTATAACAGATTATCCAGTAGAAATATCACCTCTTACAAAGAAAAAG AGAGGAAATCCTGAATTTACTGAAAGATTTGAAGGATTTGTATTTGGAAGAGAAATTTGTAATGCATATTCAGAATTAAA TGATCCTATAGTTCAAAGACAAAGATTTGAACAACAGGCTAAGGAAAGAGAACTTGGTGATGATGAAGCATATATGTTAG ATGAACAATTTATGAGTGCTCTAGAAACAGGTATGCCTCCTACAGGTGGAATGGGAATGGGAATAGATAGACTTGTAATG TTCTTAACTGACTCAGCATCAATTAGAGATGTTATATTATTCCCAACAATGAGACCTCAGAAGTAA Protein sequence : MSTEEMSMQELESQYNEQEGLRRTKLAELQNAGKDPFDVYKVNRTHTSEEVKANYDELEGKEVTVAGRLMSKRGQGKVVF SDIHDKDGKIQLFLKIDKVGEENLKQYKAFDLGDWVAATGEVFTTKTGEVSVNVNTFELTCKSLKPLPEKWHGLKDPDLR YRQREVDIITNAEVKETFIKRSKIISAMREFLDNKGFVEVETPILGAIAGGAAARPFVTHHNTLDIDMYLRIATELYLKR LIVAGFEKVYEIGRNFRNEGMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAHICEKVNGTTKVNYQGTEIDFKPPWRR ITMVDAVKEYAGVDFNQIKSDEEAQAIAKEKHLEFAKPLDTVTKGEVLNMLYEEFGEANMIQPTFITDYPVEISPLTKKK RGNPEFTERFEGFVFGREICNAYSELNDPIVQRQRFEQQAKERELGDDEAYMLDEQFMSALETGMPPTGGMGMGIDRLVM FLTDSASIRDVILFPTMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-93 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007453217.1 | lysine--tRNA ligase LysS | VFG1668 | Protein | 1e-93 | 46 |
