Gene Information

Name : cpsE1 (Cspa_c11790)
Accession : YP_007454209.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Virulence
Product : galactosyl transferase CpsE
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.8.-
Position : 1305759 - 1306421 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
TTGCAACAATTGGATCTAGAACGACAAGAAGCTTTGTTTATGGAGCAAATTGAAACAAAAAGAAGGTATTGTTTTTTCAA
GAGAATGATGGATATAATATGTTCATTGATTGGGCTTATAGCATTAGTTCCAATATTTCTTATAGTAGCAGTTGCAATTA
AGATTGAGTCAAAAGGACCAATAGTTTTTATTCAAAAGAGAGTTGGGAAGGATGGTAAAACTTTTGGTATATATAAGTTT
AGGTCCATGGTGGTAAATGCAGAAGAATTAAAAGACAAGCTATCTGATAAAAATGAGATAAGTGGGCCAATGTTTAAGAT
GAAAGAAGATCCAAGAGTAACAAAGGTTGGTAAATTTATTAGAAAGACAAGCATAGATGAGCTTCCTCAATTAATTAATG
TATTAAGAGGGGAAATGAGTCTGGTAGGACCAAGACCGTCGCTTCCAGATGAAGTTATGAAGTTTGAAAATTGGATGATG
CAGAGATTAAGTGTTAAGCCAGGTCTTACTTGTTATTGGCAAGTGTCCGGAAGAAATGATATTGGATTTAGAGAATGGAT
GAGACTAGATATTAAGTATGTAGAGGAGAGAAGTTTACTAGTTGATATACAATTAATATTTAAAACATTTTTTGTACTCT
TCGGAGATGAGCATGCAAGTTAA

Protein sequence : 
MQQLDLERQEALFMEQIETKRRYCFFKRMMDIICSLIGLIALVPIFLIVAVAIKIESKGPIVFIQKRVGKDGKTFGIYKF
RSMVVNAEELKDKLSDKNEISGPMFKMKEDPRVTKVGKFIRKTSIDELPQLINVLRGEMSLVGPRPSLPDEVMKFENWMM
QRLSVKPGLTCYWQVSGRNDIGFREWMRLDIKYVEERSLLVDIQLIFKTFFVLFGDEHAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-29 45
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 6e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpsE1 YP_007454209.1 galactosyl transferase CpsE VFG1309 Protein 2e-28 43
cpsE1 YP_007454209.1 galactosyl transferase CpsE VFG1369 Protein 1e-18 43