Gene Information

Name : MYO_13940 (MYO_13940)
Accession : YP_007450169.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_020286
Putative virulence/resistance : Virulence
Product : OmpR subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 422874 - 423611 bp
Length : 738 bp
Strand : -
Note : similar to sll0649

DNA sequence : 
ATGTGGGGGAACAGGACTGAATTTATTGCCATGCCCAACATTTTAATCGTGGAAGATGACCAGGAAATCGCCCAGCTAAT
CAGGGAAACGTTGGAGCGAGAACAGTTTACCTGCATTGTCACCAATGATGGAGAAACTGGTTTAAGAATTTTCCAGGAAC
AGGTTCCAGATTTAATTGTGTTGGATTTGATGTTACCCAAATTGGATGGACTGGAAGTTTGTACCCGCATTCGCCAACAA
CCGGGCAGCAAAGACCCCTATATTCTGATGTTGACCGCCAAAGGGGAGGAGATCGACCGCATTATTGGCCTCTCCACCGG
GGCCGATGATTATTTGGTCAAACCCTTCAGTCCGAGGGAATTGGTCGCTAGGGTACGGGCCCTATTGCGGCGGCAATTGC
GCCAGGGGCAACCAGTGGGACAAATTTATCGTACAAACCATTTTCAGGTGGACCTAGACCAACATCAGGCGAGTCGTTAC
CAGGGCGATCGCCAGGAAGAGTTGGAGTTGACCGGGTTGGAATTTAATTTATTAGCTACGTTTATGAGCTATCCGGGGCG
GGTCTGGAATCGGACCCAATTAATTGAAAAGTTGTGGGGCAATGATTTTTTTGGCGATGAACGGGTGGTGGATACCCACA
TTCGTCGATTACGCAAGAAAATTGAACCGGACCCCGCTAATCCTACTTTTATTAAAACGGTGATCGGTTTGGGCTATAAG
TTTGAAGACCCTGATTAA

Protein sequence : 
MWGNRTEFIAMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEVCTRIRQQ
PGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQLRQGQPVGQIYRTNHFQVDLDQHQASRY
QGDRQEELELTGLEFNLLATFMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYK
FEDPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYO_13940 YP_007450169.1 OmpR subfamily CP001485.1.gene721.p Protein 2e-27 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_002952.2859905.p0 Protein 7e-37 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_009641.5332272.p0 Protein 1e-36 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_013450.8614421.p0 Protein 1e-36 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_007793.3914279.p0 Protein 1e-36 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_002745.1124361.p0 Protein 1e-36 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_009782.5559369.p0 Protein 1e-36 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_002951.3237708.p0 Protein 1e-36 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_007622.3794472.p0 Protein 8e-37 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_002758.1121668.p0 Protein 1e-36 43
MYO_13940 YP_007450169.1 OmpR subfamily NC_010400.5986590.p0 Protein 2e-35 42
MYO_13940 YP_007450169.1 OmpR subfamily NC_011595.7057856.p0 Protein 3e-36 42
MYO_13940 YP_007450169.1 OmpR subfamily NC_010410.6002989.p0 Protein 3e-36 42
MYO_13940 YP_007450169.1 OmpR subfamily CP000675.2.gene1535. Protein 1e-30 42
MYO_13940 YP_007450169.1 OmpR subfamily HE999704.1.gene1528. Protein 1e-28 42
MYO_13940 YP_007450169.1 OmpR subfamily HE999704.1.gene2815. Protein 1e-37 42
MYO_13940 YP_007450169.1 OmpR subfamily AE000516.2.gene3505. Protein 3e-35 42
MYO_13940 YP_007450169.1 OmpR subfamily AE015929.1.gene1106. Protein 2e-22 41
MYO_13940 YP_007450169.1 OmpR subfamily NC_012469.1.7685629. Protein 1e-35 41
MYO_13940 YP_007450169.1 OmpR subfamily AE016830.1.gene1681. Protein 6e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYO_13940 YP_007450169.1 OmpR subfamily VFG1702 Protein 1e-26 41