Gene Information

Name : MYO_126170 (MYO_126170)
Accession : YP_007452360.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_020286
Putative virulence/resistance : Virulence
Product : OmpR subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2882290 - 2883078 bp
Length : 789 bp
Strand : +
Note : similar to slr0081

DNA sequence : 
ATGTTGGTTAAATACCATCTAGTAGGTTTCCCAATGGCAACGCTAGAAGCCCCCCCCCATAGTCTGCAACACCAGGAAAT
TCCCCCCAGCCATCGTATTTTGGTCGTTGAAGACGAGGTTTCCATTCGTGAAACCATTGTCCTATCACTGCAGGAAGAAG
GTTATGAAGTTTATGCGGTGGACGATGGACGTGATGCCTTAGCTCTGTTGCAAGAATTTAGCGAAGACCCCGGTCAGGCC
GCCGTAGACCTGATCATTCTGGACATCATGCTTCCCCAGGTAAACGGCTTAGATGTATGTCGTAGTTTGCGCTTTGGTGG
CGATAATACCCCGATTTTAATTGTCAGTGCCAAAGGCAGTGAAATGGAAAAAGTAACTGGCTTGGAAGTGGGGGCCGATG
ACTACATCACTAAGCCCTTTAGCCTGAAGGAATTGGTGGCCCGTTGCCGCGCCATGATCCGTCGCCAGGGCTTGGCTGGT
AATAACATTGCCCCATTCCGCAAATTTAGGGATTTGGTGCTTTATCCCCAGGAGTGTCGGGTGTTAATGCGGGGAGAAGA
AGTGAGTTTGGCCCCGAAGGAATTTCGCCTATTGGAATTGTTCATGAGCTATCCCCGTCGAGTCTGGTCTAGGGAACAGT
TAATTGAACATATTTGGGGCATTGATTTTATGGGAGACAGCAAAACGGTGGATGTCCATATCCGCTGGCTACGGGAAAAG
CTGGAACAGGACCCCAGTCAGCCGGAATATTTAGTCACAGTGCGGGGCTTTGGCTATCGTTTTGGTTAG

Protein sequence : 
MLVKYHLVGFPMATLEAPPHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQA
AVDLIILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAMIRRQGLAG
NNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREK
LEQDPSQPEYLVTVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYO_126170 YP_007452360.1 OmpR subfamily NC_012469.1.7686381. Protein 5e-42 45
MYO_126170 YP_007452360.1 OmpR subfamily AE016830.1.gene1681. Protein 1e-44 44
MYO_126170 YP_007452360.1 OmpR subfamily NC_012469.1.7685629. Protein 3e-41 44
MYO_126170 YP_007452360.1 OmpR subfamily NC_002745.1124361.p0 Protein 1e-37 43
MYO_126170 YP_007452360.1 OmpR subfamily NC_009782.5559369.p0 Protein 1e-37 43
MYO_126170 YP_007452360.1 OmpR subfamily NC_002951.3237708.p0 Protein 1e-37 43
MYO_126170 YP_007452360.1 OmpR subfamily NC_002758.1121668.p0 Protein 1e-37 43
MYO_126170 YP_007452360.1 OmpR subfamily NC_009641.5332272.p0 Protein 1e-37 43
MYO_126170 YP_007452360.1 OmpR subfamily NC_013450.8614421.p0 Protein 1e-37 43
MYO_126170 YP_007452360.1 OmpR subfamily NC_007793.3914279.p0 Protein 1e-37 43
MYO_126170 YP_007452360.1 OmpR subfamily NC_002952.2859905.p0 Protein 1e-37 42
MYO_126170 YP_007452360.1 OmpR subfamily NC_007622.3794472.p0 Protein 1e-37 42
MYO_126170 YP_007452360.1 OmpR subfamily NC_003923.1003749.p0 Protein 1e-37 42
MYO_126170 YP_007452360.1 OmpR subfamily HE999704.1.gene2815. Protein 2e-43 42
MYO_126170 YP_007452360.1 OmpR subfamily FJ349556.1.orf0.gene Protein 9e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYO_126170 YP_007452360.1 OmpR subfamily VFG1563 Protein 1e-34 42
MYO_126170 YP_007452360.1 OmpR subfamily VFG1702 Protein 1e-34 42
MYO_126170 YP_007452360.1 OmpR subfamily VFG1390 Protein 4e-39 41