|
Name : clpB (MYO_118990) Accession : YP_007451657.1 Strain : Synechocystis sp. PCC 6803 Genome accession: NC_020286 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : - COG ID : - EC number : - Position : 2060173 - 2062791 bp Length : 2619 bp Strand : + Note : similar to slr1641 DNA sequence : ATGCAACCCACAGATCCTAATAAATTTACGGAGAAAGCTTGGGAGGCGATCGCCAAAACACCGGAGATTGCTAAACAGCA TCGACAACAGCAAATTGAGACGGAACACCTACTCAGTGCCCTACTAGAACAAAATGGTCTGGCCACCAGCATCTTTAATA AGGCTGGGGCGAGCATTCCCCGAGTTAACGATCAAGTTAATAGCTTTATTGCCCAACAGCCAAAATTAAGTAATCCGAGT GAATCGATTTATTTAGGCCGCAGTCTCGATAAATTGTTGGACAATGCGGAAATAGCCAAGTCTAAATATGGAGACGACTA TATTTCCATCGAGCACTTGATGGCGGCTTACGGCCAAGATGACCGCCTGGGCAAAAACTTATATCGAGAAATTGGCCTAA CAGAAAATAAGTTGGCAGAAATTATCAAGCAAATTAGAGGAACCCAAAAAGTGACCGATCAAAATCCAGAGGGCAAATAC GAATCCCTTGAAAAATATGGGCGAGATTTAACGGAATTAGCCCGGGAAGGTAAACTAGATCCTGTCATTGGCCGGGATGA AGAAGTGCGGCGCACCATTCAGATCCTTTCCCGCCGCACAAAAAATAACCCTGTGTTAATTGGGGAACCGGGGGTTGGTA AAACGGCGATCGCCGAAGGTTTAGCCCAAAGAATTATTAACCATGACGTACCGGAATCATTGCGGGATCGCAAACTAATT TCCCTCGATATGGGGGCGTTAATTGCCGGGGCAAAATACCGGGGGGAATTTGAAGAAAGACTTAAAGCGGTACTTAAAGA AGTTACCGACAGCCAGGGGCAAATTATTCTCTTTATTGACGAAATTCATACCGTTGTCGGCGCTGGGGCCACCCAAGGAG CCATGGATGCGGGCAACTTATTGAAACCCATGTTAGCCCGGGGTGCTTTGCGTTGTATCGGGGCCACCACTTTAGATGAA TATCGCAAATATATCGAAAAAGATGCGGCTTTGGAACGACGTTTCCAGGAAGTTTTAGTGGATGAACCCAATGTATTAGA TACCATTTCCATTCTCCGGGGATTAAAAGAACGCTATGAAGTACACCACGGCGTAAAAATTGCCGATAGTGCCCTGGTAG CGGCGGCCATGTTGTCCAATCGTTACATCAGTGATCGTTTTCTGCCGGATAAAGCTATTGATTTAGTAGACGAAGCAGCG GCCAAATTAAAAATGGAAATCACCTCCAAACCAGAGGAATTAGATGAAGTTGACCGGAAAATTCTCCAACTAGAAATGGA GCGTTTATCTTTACAACGGGAAAATGATTCTGCTTCCAAGGAGCGGCTAGAAAAATTGGAGAAAGAGTTGGCTGATTTTA AAGAAGAACAGTCTAAACTTAATGGCCAATGGCAGTCGGAAAAAACGGTTATTGATCAAATTCGTACTGTTAAGGAAACC ATCGACCAGGTGAACCTAGAAATTCAACAGGCCCAACGGGATTACGACTACAATAAAGCAGCGGAGTTACAGTATGGCAA ATTAACTGATTTACAGCGGCAAGTGGAAGCTTTGGAAACCCAATTGGCGGAGCAACAAACCTCTGGCAAATCCCTCTTAC GGGAAGAAGTTTTAGAGTCTGACATTGCTGAAATTATCTCGAAATGGACCGGCATTCCCATCAGTAAATTGGTGGAATCG GAAAAAGAAAAACTGCTCCACTTGGAAGATGAACTACACAGCCGAGTGATTGGTCAGGATGAAGCGGTAACCGCCGTAGC CGAAGCCATTCAACGCTCCCGAGCTGGTCTTTCCGATCCTAATCGTCCCACCGCTAGCTTTATTTTTCTGGGCCCCACAG GGGTCGGGAAAACTGAGTTAGCGAAGGCTTTGGCGAAAAATTTATTCGACACGGAAGAAGCCCTGGTGCGGATTGATATG TCTGAATATATGGAAAAACACGCTGTTTCCCGTTTAATGGGGGCCCCTCCGGGCTATGTGGGCTATGAAGAAGGGGGACA ATTGACGGAAGCAATTCGCCGCCGGCCCTATTCGGTCATTCTTTTTGACGAGATTGAAAAAGCCCATGGGGATGTGTTTA ACGTCATGCTCCAAATCCTGGATGATGGCCGTTTAACCGATGCCCAAGGCCATGTGGTGGACTTCAAAAATACGATTATC ATTATGACCAGTAACCTGGGCTCCCAATACATTTTGGATGTGGCGGGGGATGATAGTCGTTATGAAGAAATGCGGAGCCG AGTTATGGATGTAATGCGGGAAAACTTCCGCCCAGAATTTCTCAATCGGGTGGATGAAACGATTATTTTCCATGGCTTAC AAAAATCCGAGTTACGATCCATTGTCCAAATTCAAATTCAGTCTTTGGCTACCCGTTTGGAGGAACAAAAATTAACTTTG AAGTTAACGGATAAAGCCCTAGATTTTCTGGCTGCCGTGGGCTATGACCCCGTTTATGGGGCCCGACCTTTAAAACGAGC CGTCCAAAAATACCTAGAAACGGCGATCGCCAAGGGAATTTTACGGGGGGATTACAAACCTGGTGAGACCATTGTGGTGG ATGAAACCGACGAACGCCTCAGTTTTACCAGTTTAAGGGGGGATTTAGTCATCGTTTAG Protein sequence : MQPTDPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALLEQNGLATSIFNKAGASIPRVNDQVNSFIAQQPKLSNPS ESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQDDRLGKNLYREIGLTENKLAEIIKQIRGTQKVTDQNPEGKY ESLEKYGRDLTELAREGKLDPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLI SLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGATTLDE YRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAA AKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKET IDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSLLREEVLESDIAEIISKWTGIPISKLVES EKEKLLHLEDELHSRVIGQDEAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDM SEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTII IMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTL KLTDKALDFLAAVGYDPVYGARPLKRAVQKYLETAIAKGILRGDYKPGETIVVDETDERLSFTSLRGDLVIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-103 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-100 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-100 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007451657.1 | ClpB protein | VFG2076 | Protein | 4e-112 | 43 |
