Gene Information

Name : MYO_118510 (MYO_118510)
Accession : YP_007451610.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_020286
Putative virulence/resistance : Virulence
Product : OmpR subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2011250 - 2011954 bp
Length : 705 bp
Strand : +
Note : similar to slr0947

DNA sequence : 
GTGGTCGATGACGAGGCCAGCATCCGACGCATACTGGAAACCCGTTTATCCATGATTGGCTATGAAGTGGTGACCGCTGC
CGACGGTGAAGAGGCGATCGCCACTTTCCATGAGAGCGACCCCGATTTGGTGGTGTTGGATGTGATGATGCCCAAGCTGG
ACGGCTACGGCGTTTGCCAAGAACTACGTAAAGAATCGGACATTCCCATTATTATGCTTACCGCCCTGGGGGATGTGGCC
GATCGCATTACCGGTTTGGAACTGGGGGCCGATGATTATGTGGTGAAGCCCTTTTCCCCCAAGGAATTGGAAGCTAGAAT
CCGGTCCGTGCTACGGCGGGTGGACAAAAACGGTATGCCGGGCATTCCCAGTTCGGGCGTGTTGCAAATTGCCACCATTC
GCATTGATACCAACAAGCGTCAAGTGTATAAAGGGGATGAGCGCATCCGCCTAACAGGAATGGAATTTAGCCTGTTGGAA
TTGTTGGTGAGTCGCTCCGGAGAGCCCTTTTCCCGTTCGGAAATTCTCCAGGAAGTGTGGGGCTACACCCCCGAACGCCA
TGTGGATACCAGGGTGGTGGACGTGCATATTTCCCGCCTGCGGGCCAAACTAGAGGAAGACCCCAGCAATCCCGAATTAA
TTCTTACTGCCCGGGGCACCGGTTACCTGTTCCAACGCATTCTGGAACCGGGGGAAGAACCGTAA

Protein sequence : 
MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQELRKESDIPIIMLTALGDVA
DRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLE
LLVSRSGEPFSRSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILEPGEEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-29 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYO_118510 YP_007451610.1 OmpR subfamily NC_002952.2859905.p0 Protein 1e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_009641.5332272.p0 Protein 2e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_013450.8614421.p0 Protein 2e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_007793.3914279.p0 Protein 2e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_007622.3794472.p0 Protein 1e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_002745.1124361.p0 Protein 2e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_009782.5559369.p0 Protein 2e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_002951.3237708.p0 Protein 2e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_002758.1121668.p0 Protein 2e-44 48
MYO_118510 YP_007451610.1 OmpR subfamily NC_003923.1003749.p0 Protein 2e-44 47
MYO_118510 YP_007451610.1 OmpR subfamily BAC0125 Protein 9e-38 46
MYO_118510 YP_007451610.1 OmpR subfamily AE000516.2.gene3505. Protein 2e-40 46
MYO_118510 YP_007451610.1 OmpR subfamily NC_012469.1.7685629. Protein 3e-40 44
MYO_118510 YP_007451610.1 OmpR subfamily CP000034.1.gene3671. Protein 7e-38 43
MYO_118510 YP_007451610.1 OmpR subfamily HE999704.1.gene2815. Protein 4e-39 43
MYO_118510 YP_007451610.1 OmpR subfamily CP001918.1.gene5135. Protein 1e-25 42
MYO_118510 YP_007451610.1 OmpR subfamily BAC0083 Protein 9e-35 42
MYO_118510 YP_007451610.1 OmpR subfamily BAC0197 Protein 1e-32 41
MYO_118510 YP_007451610.1 OmpR subfamily NC_012469.1.7686381. Protein 3e-39 41
MYO_118510 YP_007451610.1 OmpR subfamily CP000647.1.gene4257. Protein 3e-28 41
MYO_118510 YP_007451610.1 OmpR subfamily CP004022.1.gene3215. Protein 2e-32 41
MYO_118510 YP_007451610.1 OmpR subfamily BAC0638 Protein 2e-26 41
MYO_118510 YP_007451610.1 OmpR subfamily BAC0533 Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYO_118510 YP_007451610.1 OmpR subfamily VFG1390 Protein 4e-37 42
MYO_118510 YP_007451610.1 OmpR subfamily VFG0596 Protein 7e-30 42
MYO_118510 YP_007451610.1 OmpR subfamily VFG1389 Protein 3e-32 42
MYO_118510 YP_007451610.1 OmpR subfamily VFG1386 Protein 4e-34 41