|
Name : kdpB (MYO_113650) Accession : YP_007451131.1 Strain : Synechocystis sp. PCC 6803 Genome accession: NC_020286 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : - COG ID : - EC number : - Position : 1493227 - 1495299 bp Length : 2073 bp Strand : + Note : similar to slr1729 DNA sequence : ATGAACTCCACTTCCACTGTGCGACAACCGGGGGGGCCACGGCAGCAGCGGCGACACACCCCAAAAGCCAATCTTTCCGA TCTCTATCAAAGGGCTTTCAAGGAAGCCTGGGTGAAGCTCAATCCCAAAATCATGGTCAAAAATCCGGTCATGTTTATGG TTTGGGTCGGCACCTTGATCACTGGGATGTTGACTCTCAATCCCAACCTATTTGGGGTTACTGGCACCTCAGCCATGTTT AACGGGTTAGTGACGGTTATTTTGTTATTTACGGTTTTATTTGCCAACTTTGCCGAAGCCGTGGCCGAGGGTAGGGGAAA GGCCCAGGCCGATGCCCTGCGTTCAACCCAGACTCAGACCTATGCCCAGCGAATTTTAGCCGATGGTTCCCTAGAAATGG TCAGCTCCACCCATCTACGGAAAGGCGATCGTATTGTCGTTTCGGTCGGCGATATTATCCCTGCCGACGGGGAAGTGTTG GAGGGGGTGGCCTCGGTGGATGAATCCGCCATTACGGGGGAATCGGCTCCGGTACTGAAGGAACCAGGTTCCGATGTGGC CAGTTCCGTGACGGGGGGCACCCGCATCATTTCCGATGAACTGATCATCCGGGTGACAGCAGATCCCGGTAAGGGCTTTA TTGACCGCATGATTGACCTGGTGGAAGGGGCAGAACGCAGTAAAACCCCCAATGAAATTGCCCTAACGGTATTGTTGGCG GTGTTGACCTTGGTGTTCCTAATTGTGGTGGCAACTCTGCCTCCCCCGGCTAATTACATCGATAGCCCGGTGAGCATTAC CCTACTTATTGCCCTCTTGGTGGCGTTGATTCCCACCACCATTGGCGGTTTGCTGAGTGCCATTGGCATTGCTGGCATGG ACCGGGTAGCCCAGTTTAATGTGGTGGCCACTTCCGGGCGGGCCGTGGAGGCCTGCGGCGACATCAACACCTTGGTGTTA GATAAGACGGGCACTATCACTTTGGGGAACCGTTTAGCGGAGACCTTTCTGCCAGTGAATGGTCATTCTTTGAAAGAAGT GGCGGCGATCGCCTTGGCGGCAAGTATTTTTGACACTACCCCAGAGGGAAAATCCATTGTGCGCCTAGCGGAAAAGATGG GAGCTACTTTGGACTTCGATCGCCAGCAGGCGGAGGGGGTGGAATTTTCTGCTCGGACTCGCATGAGCGGCACCGATTTA CCCGATGGCAGTGAAGTGCGGAAAGGGGCGGTGGATGCCATCCGGGGCTTTGTGCGGTCAAGGGGGGGCAAGTCTCCCAC CGGCCTTGACGAAGCCTACGGAAAGGTTTCCCATCTAGGGGGCACCCCCTTAGCGGTCTGTCGTAACGATGAGATTTACG GTGTAATTTATCTTAAGGACATCATCAAACCAGGTATTCAAGAACGATTTAATCAACTGCGACGCATGGGGGTCCGCACC GTTATGCTCACGGGGGACAATCGCATTACTGCTTCGGTAATTGCCAAGGAAGCGGGGGTTGATGACTTCATTGCCGAAGC TACTCCGGAAGACAAAATCCAGGTTATTCAACAGGAACAAGCCGCTGGTAAGTTGGTGGCCATGACCGGAGACGGTACCA ACGATGCCCCGGCCCTCGCCCAGGCCAATGTGGGTTTAGCGATGAATTCCGGCACCCAAGCGGCTAAGGAAGCGGCCAAT ATGGTGGACCTCGATTCTGACCCCACTAAACTGATTGACCTGGTCACCATTGGCAAACAACTTCTAATCACTAGGGGGGC ATTGACCACTTTTTCCCTGGCCAACGACATTGCCAAATATTTCGCCATTATTCCTGCCATGTTCGCCGGTATTGGCATTG GTGCCCTCAACATCATGGATTTGAAGAGTCCCCAATCCGCCGTACTTTCGGCCCTGATTTACAACGCTCTGATCATCCCT GCCCTCATTCCTCTGGCCCTACGGGGGGTGAAGTTTCGTCCTTTAAGTGCCGATCAATTACTCCAGCGCAACATTTTGGT TTATGGGCTGGGGGGCATCATTGTGCCCTTTGTGGCCATCAAGCTCATAGACCTCGGTATTTCGTTGCTTTGA Protein sequence : MNSTSTVRQPGGPRQQRRHTPKANLSDLYQRAFKEAWVKLNPKIMVKNPVMFMVWVGTLITGMLTLNPNLFGVTGTSAMF NGLVTVILLFTVLFANFAEAVAEGRGKAQADALRSTQTQTYAQRILADGSLEMVSSTHLRKGDRIVVSVGDIIPADGEVL EGVASVDESAITGESAPVLKEPGSDVASSVTGGTRIISDELIIRVTADPGKGFIDRMIDLVEGAERSKTPNEIALTVLLA VLTLVFLIVVATLPPPANYIDSPVSITLLIALLVALIPTTIGGLLSAIGIAGMDRVAQFNVVATSGRAVEACGDINTLVL DKTGTITLGNRLAETFLPVNGHSLKEVAAIALAASIFDTTPEGKSIVRLAEKMGATLDFDRQQAEGVEFSARTRMSGTDL PDGSEVRKGAVDAIRGFVRSRGGKSPTGLDEAYGKVSHLGGTPLAVCRNDEIYGVIYLKDIIKPGIQERFNQLRRMGVRT VMLTGDNRITASVIAKEAGVDDFIAEATPEDKIQVIQQEQAAGKLVAMTGDGTNDAPALAQANVGLAMNSGTQAAKEAAN MVDLDSDPTKLIDLVTIGKQLLITRGALTTFSLANDIAKYFAIIPAMFAGIGIGALNIMDLKSPQSAVLSALIYNALIIP ALIPLALRGVKFRPLSADQLLQRNILVYGLGGIIVPFVAIKLIDLGISLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-134 | 59 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 59 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 59 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 59 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 59 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 7e-135 | 59 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 2e-124 | 54 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-124 | 54 |
