Gene Information

Name : ST1E_0340 (ST1E_0340)
Accession : YP_007448416.1
Strain : Candidatus Kinetoplastibacterium galatii TCC219
Genome accession: NC_020284
Putative virulence/resistance : Virulence
Product : arginine decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : 4.1.1.19
Position : 98093 - 100348 bp
Length : 2256 bp
Strand : +
Note : Amino acid transport and metabolism; SecretomeP prediction: 0.08.

DNA sequence :
ATGAGATTTTTATTTCCTATTTTTATAATTGATGAAGACTATCGTTCTGAGAATGTTTCTGGTCTTGGTATTAGAGCATT
AGCCGAGGCTATAGAAGCTCAAGGAGTGAAGGTTATAGGCGTTACAGGTTACGGAGACATAAGCTCATTTGCGCAACAGC
AAAGTCGTGCTAGTGCTTTCATCTTATCTATTGATGACGAGGAATTTGATGTTGATTCTCCAGAAGATGTTGCCATTATT
ATAAAAAAATTACGTGCTTTTATTGGTGAATTAAGATTTCGTAATGCAGATATACCAATATATTTATATGGAGAAACTAG
AACCTCTGAGCATATTCCAAATGATATTTTGAGAGAATTGCACGGTTTTATTCATATGTTCGAAGATACTCCGGAGTTTG
TTGCTAGGCATATAATAAGAGAAGCAAATAACTATGTATCTTCTTTGGCTCCACCTTTTTTCGGAGAGTTAGTTAAATAT
GCTCAAGATGGATCTTATTCTTGGCATTGTCCAGGTCATTCTGGTGGAGTTGCATTTTTGAAAAGTCCTGTTGGGCAAAT
GTTCCATCAGTTTTTTGGTGAAAACATGCTTCGTGCAGATGTATGTAATGCTGTAGATGAATTGGGGCAATTACTGGATC
ATACAGGCCCAGTTGCTGAATCTGAGCTTAACGCTGCACGTATTTTTCATGCTGATCGTTGTTACTTTGTTACTAATGGC
ACATCAACGTCTAATAAAATTGTTTGGCATGCAAATGTTGCGAATGATGACATAGTGTTAGTAGACCGCAATTGTCACAA
GTCTATTTTACATGCTATAACTATGACTGGAGCTATTCCTGTTTTTTTAAGACCAACACGTAATAACTTTGGTATAATAG
GTCCAATACCTCTGGATGAATTCAATCCTGATAATATTAATAAAAAGATATTATCGAACCCGCTGGCAAAAAAAGTAGCA
AATAAAAAACCAAGAATATTAACTCTTACTCAAAGTACATACGATGGTGTTGTTTATAATGTTGAAATGATAAAAAAGCA
TCTTGATGGTTATGTAGATACTCTTCATTTTGATGAGGCTTGGTTACCACATGCATCCTTTCATGATTTTTACCAAGACA
TGCATGCTATTGGAGAAAATAGACCTAGGGGTAATACCTCCATGATTTTTGCTACGCATTCAACACATAAATTATTAGCA
GGAATATCTCAAGCATCTCAAATAATTGTTCAAGAACCAGCTGATAGAAAATTTGATCATACGGCTTTTAATGAAGCATA
TCTAATGCATACTTCTACATCTCCACAGTATGCAATTATAGCTTCTTGCGATGTTGCTGCTGCTATGATGGAGCCTCCAG
GAGGAACAGCATTAGTAGAAGAAAGCATAAGAGAAGCAATGGATTTTAGACGTGCCATGCGTAAGGTTGAGTCAGAATTT
GGAAAAAATGATTGGTGGTTTAAAGTTTGGGGTCCGAATAGGATGGCTCAGGAAGGAATAGGAAATCGCGAAGACTGGAT
GTTGTATTCTGATGATCAGTGGCATGGTTTTGGAGATTTGGCATGTGGATTTAACATGTTAGATCCTATAAAAACTACAA
TTGTAACTCCAGGATTGAGCATTTCTGGCAGTTTTGGAGAATCTGGGATTCCTGCTTCATTAGTCTCAAAGTATCTAGCA
GAACATGGAGTAGTTGTAGAAAAAACAGGACTTTATTCATTTTTCATTTTATTCACAATTGGTATTACTAAAGGACGATG
GAATAGTTTGTTAACTGCTTTACAGCAATTTAAAGATGATTATGATCGTAATCAACCAATGTGGCGTATATTGCCTGGAT
TCTGTAAGTCTCAGAGAAAATACGAGCGTTTAGGAATTAGAGATCTTTGCCATCAAATTCATAATACATATCGCGAGTAT
GATATAGCTCGTCTTACGACTGAAATGTATTTAAGCGAAATGATTCCCGCAATGAAACCATCAGAAGCTTTTGCCAAAAT
GGCTCATCGTGAAGTAGAGAAAGTCAAAATATCTGATCTTGAAGGACGTATTACAGGTGTATTGCTGACACCATATCCTC
CAGGAATACCGTTGCTAATTCCAGGAGAACGTTTTAATAAAACAATAGTTAATTATTTGGAATTTGTCCGTGATTTTAAT
GATGAATTTCCAGGATTCGAGAATTATATGCATGGTCTAACTATAGACACCGATGAAAATGGCAATAAAAATTATTATGT
TGATTGCTTAGCTTAG

Protein sequence :
MRFLFPIFIIDEDYRSENVSGLGIRALAEAIEAQGVKVIGVTGYGDISSFAQQQSRASAFILSIDDEEFDVDSPEDVAII
IKKLRAFIGELRFRNADIPIYLYGETRTSEHIPNDILRELHGFIHMFEDTPEFVARHIIREANNYVSSLAPPFFGELVKY
AQDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAESELNAARIFHADRCYFVTNG
TSTSNKIVWHANVANDDIVLVDRNCHKSILHAITMTGAIPVFLRPTRNNFGIIGPIPLDEFNPDNINKKILSNPLAKKVA
NKKPRILTLTQSTYDGVVYNVEMIKKHLDGYVDTLHFDEAWLPHASFHDFYQDMHAIGENRPRGNTSMIFATHSTHKLLA
GISQASQIIVQEPADRKFDHTAFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIREAMDFRRAMRKVESEF
GKNDWWFKVWGPNRMAQEGIGNREDWMLYSDDQWHGFGDLACGFNMLDPIKTTIVTPGLSISGSFGESGIPASLVSKYLA
EHGVVVEKTGLYSFFILFTIGITKGRWNSLLTALQQFKDDYDRNQPMWRILPGFCKSQRKYERLGIRDLCHQIHNTYREY
DIARLTTEMYLSEMIPAMKPSEAFAKMAHREVEKVKISDLEGRITGVLLTPYPPGIPLLIPGERFNKTIVNYLEFVRDFN
DEFPGFENYMHGLTIDTDENGNKNYYVDCLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 3e-105 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST1E_0340 YP_007448416.1 arginine decarboxylase VFG1670 Protein 2e-105 43