Gene Information

Name : ST1E_0550 (ST1E_0550)
Accession : YP_007448567.1
Strain : Candidatus Kinetoplastibacterium galatii TCC219
Genome accession: NC_020284
Putative virulence/resistance : Virulence
Product : class II lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 286743 - 288272 bp
Length : 1530 bp
Strand : -
Note : -

DNA sequence :
ATGACTAATAAGAATGACTCTATAAATTCTGATCATGAAGAAAACAGACTTATCTTAGAAAGACGATTAAAACTTAATAA
ATACAGGGAAATAGGTTTTTCATACCCTAATAATATTACTCCGACTGAAAAGAATATAGATATCATAAACAAATATAAAG
ATTTAGATTCTGATATTATTAATTCGAAAGATATAAATGTTAGGATTTCTGGACGCATGATGCTGAAAAGAATTATGGGC
AAAGCAAGCTTTTCAACAATTCAAGATAGCACAGGACGTATACAGATATATATATCCCAAAAAAATGTTAATGATGAAAT
ATATAATAATTTTAAACAATTTGACTTAGGTGACATATTATTAATAGAAGGAAAAGTCTTTAAAACAAATAAAGGAGAAT
TATCTATAAATGTTAAATTGATATCAATCATATCAAAAGCAATAAGACCATTACCTGAAAAATTTCATGGTATATCTGAT
CCCAATATAAAGTATAGACAGAGATATGTAGATCTAATAGTAACAGAAGACACAAAAAAAACCTTTGAATTGCGTAGCAA
AATAATAACTAATATTAGACAACATATGTCTAAAGAGGGTTTTATAGAAGTAGAAACACCAATGCTACATACAATTCCAG
GTGGTGCCTCTGCTAAGCCATTTACCACTCACCACAACTCTCTCAATATGGATATGTATTTACGCATAGCTCCAGAGCTG
TATTTAAAAAGACTAATAGTAGGTGGTTTTGATAAAGTATTTGAATTAAATCGCAACTTTAGAAATGAAGGAATAAGCCC
AAGACATAATCCTGAATTCACAATGATGGAGTTTTATGCTACATATACAGATTATAATTGGATGATGAACTTTACTGAAA
AGTTAATATGCGAAATATCAATGGCTATAAATAAAAAGAATTATTTAAATTATCAAGATAAAACTATAAATATCTCAAAA
CCATTTGAAAGATTGAATATATGTGATGCCATTTGTAAATATAATAAGAAATACAACATAGAGCAGCTGAATGATTATGA
GTTTTTACAAAAAGAAATAGAACATATTGACAAAAAAATCTCACAAGATTTCCTAAAATCTTCCAAATTAGGAGAACTAC
AATTATGTCTTTTTGAAAAAACAACAGAAGAAAAAATCTGGGATCCAACATATATAATAGACTATCCTGTTGAAACTTCA
CCGTTAGCAAGACAATCAGACATTAACAAAAAAATAACAGAAAGATTTGAATTATTTATCGCTGGTAAAGAAATAGCCAA
TGGATTTTCTGAGTTGAATGATCCTGAAGAACAAGCAAGAAGACTATTAGAACAAGCAGAAAATAAAAATAATGATTCAG
AAGATAATCATAAAATGTTTTTTGATTCCGACTACATAACAGCATTAGAATATGGCATGCCCCCAACTGGAGGATGTGGT
ATAGGAATAGATAGGCTAGTAATGCTAATAACAGATAAATCAAATATAAAAGACGTAATACTATTTCCTCATTTAAGAGA
AAAAATATAG

Protein sequence :
MTNKNDSINSDHEENRLILERRLKLNKYREIGFSYPNNITPTEKNIDIINKYKDLDSDIINSKDINVRISGRMMLKRIMG
KASFSTIQDSTGRIQIYISQKNVNDEIYNNFKQFDLGDILLIEGKVFKTNKGELSINVKLISIISKAIRPLPEKFHGISD
PNIKYRQRYVDLIVTEDTKKTFELRSKIITNIRQHMSKEGFIEVETPMLHTIPGGASAKPFTTHHNSLNMDMYLRIAPEL
YLKRLIVGGFDKVFELNRNFRNEGISPRHNPEFTMMEFYATYTDYNWMMNFTEKLICEISMAINKKNYLNYQDKTINISK
PFERLNICDAICKYNKKYNIEQLNDYEFLQKEIEHIDKKISQDFLKSSKLGELQLCLFEKTTEEKIWDPTYIIDYPVETS
PLARQSDINKKITERFELFIAGKEIANGFSELNDPEEQARRLLEQAENKNNDSEDNHKMFFDSDYITALEYGMPPTGGCG
IGIDRLVMLITDKSNIKDVILFPHLREKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-117 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST1E_0550 YP_007448567.1 class II lysyl-tRNA synthetase VFG1668 Protein 2e-117 49