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Name : CDEE_0822 (CDEE_0822) Accession : YP_007448095.1 Strain : Candidatus Kinetoplastibacterium crithidii TCC036E Genome accession: NC_020283 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 572876 - 574180 bp Length : 1305 bp Strand : - Note : Translation, ribosomal structure and biogenesis; SecretomeP prediction: 0.07 DNA sequence : ATGTTAGATATCAATATTATACGTAAAGAACCACGAAAATTGTTTGAGAAATTGTCTACTCGTGGTTATGACCTGGACAT TTCCTATTTTGAAGAATTAGAATTTAGTCGTAAAAAACTTCAAAAACAGACTGAAGATATGCAAGCTAAGCGTAATTCTT TGGCAAAGAAAATAGGTTTTTTAAAATCACAAGGACTAGATGCAAATGATTTAATTCTTGAATCTCAATCTATACCTGAA GACTTAAAAAATCTAGAACAAAAACTTTCTTATTATCAGGAGGAAATTAATAAAATATTATTTTCTATTCCAAATGTTCC ACATGCTAGTGTTCCTATTGGCTCTAATGAACAAGATAACATTGAGGTTCGTCGATGGACCCCAGATCAAAGGGTTGTTG ATGAAAGTTTTGATTATAAAGATCATGTTACAGTAGGTGAGCCTCTTGGGCTTGATTTTTCTACTGCAGCCAAAATGTCT GGTTCTAGATTTTTATTCATGACTGGTGGTTTAGCTCGTTTGCATAGAGCATTGTCACAGTTTATGTTGGATTTGCATAT TAATCATGGTTACGTTGAGTGCTATACTCCTTACATAGTCAATGCTTCTGCTTTGCTTGGAACTGGTCAGTTGCCTAAGT TCAAGGAGGAAATGTTTGCTATAAAGAAAGGTTCATTGAATTATGGCAACAATAGTATTGATGAACAGTATTTAATCTCT ACTTCGGAAATTACTTTAGTTGGCAGGGTATCTAATAGCATACTAAATATGAATGAGTTGCCCATTAAATTAACTGCTCA TACTCCTTGTTTTCGTTCTGAAGCAGGAAGTGGTGGTCGTGATATTAAAGGTATGATCAGGCAGCACCAGTTTGATAAAG TTGAATTAGTTCAAATTGTTCATCCTAGTACTTCATATAATGCTTTAGATGATGTTTTATCTGACGCTGAAAGAGTGTTG CAATTATTAGAACTTCCTTATAGGGTTGTTTTATTATGTTCTGGTGACATGGGGTTTTGTTCAGCTAAAACTTATGATCT AGAAGTTTGGTTGCCATCTCAGAAAAATTGGCGTGAAATATCATCTGTTTCTAATTGCGAAGATTTTCAAGCAAGGAGAA TGAAAGCTCGTTTCCGTAATGATCAAGGTGTGCTTGAATATGTACATACAATTAATGGCTCAGCTCTTGCTATAGGTAGG ACCTTAGTGGCTATTTTAGAAAATTACCAACAAAAAGACGGTAGTTTGATTATACCAGAAGTTCTTCGTGGTTATATGAA TGGTGATAGTATTTTAAGGCCTTAG Protein sequence : MLDINIIRKEPRKLFEKLSTRGYDLDISYFEELEFSRKKLQKQTEDMQAKRNSLAKKIGFLKSQGLDANDLILESQSIPE DLKNLEQKLSYYQEEINKILFSIPNVPHASVPIGSNEQDNIEVRRWTPDQRVVDESFDYKDHVTVGEPLGLDFSTAAKMS GSRFLFMTGGLARLHRALSQFMLDLHINHGYVECYTPYIVNASALLGTGQLPKFKEEMFAIKKGSLNYGNNSIDEQYLIS TSEITLVGRVSNSILNMNELPIKLTAHTPCFRSEAGSGGRDIKGMIRQHQFDKVELVQIVHPSTSYNALDDVLSDAERVL QLLELPYRVVLLCSGDMGFCSAKTYDLEVWLPSQKNWREISSVSNCEDFQARRMKARFRNDQGVLEYVHTINGSALAIGR TLVAILENYQQKDGSLIIPEVLRGYMNGDSILRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-88 | 46 |
