Gene Information

Name : A284_12007 (A284_12007)
Accession : YP_007447257.1
Strain :
Genome accession: NC_020274
Putative virulence/resistance : Unknown
Product : ABC transporter, permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5314 - 6444 bp
Length : 1131 bp
Strand : +
Note : COG0842 ABC-type multidrug transport system, permease component

DNA sequence :
ATGAATTCGTTGCACATAGCAGGACGTATTTTCAAACAGACGATTCGAGATGTAAGAACATTGGCACTGTTACTTATTGC
ACCTATATTACTATTGTCGCTACTATATTACATTTTTACAGTTGCCGATAATACGAATGGCGTAACAGTTGGGGTTCACG
ATGTACCAGATTCATTAATGACTGAATTACATGATAAAGATATTCACGTTAAACATTATAAAAATGACAATGATATAAGT
GATAAAATTAAAGACGACAAATTAACAGGATTTTTGCACAGTGATGGTCAAAAAGTATCAGTGACTTATGCTAACGATAA
TCCTACACAAGCAGGAGAACTAACAGGTGCAAATCAAAAATGGTTAATGAGTCATAACATGAATGCCATGAAAGATAATA
CTAATAAATTGCATCAAGCGTTAACTAAAATACAACAAAAAATGCCCGGGGATGGGGGAGACACGCCTCATCAAGATATG
GCTAAACCATATAAACTAACAACGCACTATTTATATGGTTCATCAGATTCTACGTATTTTGATATGATAAATCCTATTTT
AATTGGATTTTTTGTCTTTTTCTTTACGTTTTTAATTTCTGGCATTGGCTTATTAAAAGAGCGTACTTCTGGCACATTAG
AACGTTTACTTGCCTCTCCAATAAAAAGAAGTGAAATTATTTTTGGTTATGTTTTCGGTTATGGTAGTTTTAGCGTTATC
CAAACAATAGTTGTCGTATTATATGCAATTTATATTCTGCATATAGACTTAGTAGGTTCGATATGGTTCGTACTATTAAC
GGCAATATTAACAGCGCTTGTCGCTGTGACATTCGGTATATTATTATCTACCTTTGCTTCCTCAGAATTCCAAATGATTC
AATTTATACCATTAGTCATAGTGCCACAAGTACTATTTGCAGGCATTATACCAATTGAATCAATGAATAAAGGATTACAA
TACTTTTCACATATCATGCCGTTATTCTATACCGGCCAAACGATGCAAAATATTATGATCAAGGGTTATGGATTCAACGA
TATTTACATTTATTTAATTGTGTTATTCGCATTTTTCATTTTCTTATTGATTTTAAATATTATAGGCATGAAAAGATATA
GAAAAGTTTAG

Protein sequence :
MNSLHIAGRIFKQTIRDVRTLALLLIAPILLLSLLYYIFTVADNTNGVTVGVHDVPDSLMTELHDKDIHVKHYKNDNDIS
DKIKDDKLTGFLHSDGQKVSVTYANDNPTQAGELTGANQKWLMSHNMNAMKDNTNKLHQALTKIQQKMPGDGGDTPHQDM
AKPYKLTTHYLYGSSDSTYFDMINPILIGFFVFFFTFLISGIGLLKERTSGTLERLLASPIKRSEIIFGYVFGYGSFSVI
QTIVVVLYAIYILHIDLVGSIWFVLLTAILTALVAVTFGILLSTFASSEFQMIQFIPLVIVPQVLFAGIIPIESMNKGLQ
YFSHIMPLFYTGQTMQNIMIKGYGFNDIYIYLIVLFAFFIFLLILNIIGMKRYRKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0095 NP_763650.1 hypothetical protein Not tested SCCpbp4 Protein 3e-60 49
SH0082 YP_251997.1 hypothetical protein Not tested SCCmec Protein 3e-59 48
SH2614 YP_254529.1 hypothetical protein Not tested ¥ðSh2 Protein 1e-51 43