Gene Information

Name : KSO_003955 (KSO_003955)
Accession : YP_007444169.1
Strain : Bacillus amyloliquefaciens IT-45
Genome accession: NC_020272
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 753582 - 754388 bp
Length : 807 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGAACTCATTATCGGCGGAACAGCTTACTGTTGGTTATGGCGACCGTTTGATAGCGAAAGAATTGGATATCGCCATCCC
GAAAGGAAAAATTACAACGCTGATCGGTCCGAACGGCTGCGGAAAATCGACGGTTCTCAAAACGATGTCAAGAATCATGA
AACCGAAATCCGGCGCCGTCTATTTAAACGGACAGGCGATCATGCAAAAATCCACGAAGGACATCGCCAAGGAAATGGCA
ATTCTTCCGCAGACGCCTGAAGCGCCGAGCGGGCTGACGGTGTACGAACTTGTTTCTTACGGCAGGTTTCCGCATCAGTC
CGGAATGGGCCGCTTGAGTGATAAAGACCGTGACATGATCAAATGGGCGCTTGAAGAGACGGGGATGGCCGAATTTTACG
ACCGGCCGATCGAAGCGCTTTCCGGGGGGCAGCGGCAGCGTGTGTGGATCGCCATGGCGCTCGCTCAAGAAACGGAGCTG
CTGCTTCTTGATGAACCGACCACTTATTTAGATCTCGCCCATCAGCTTGAAATTTTGCAGCTGCTGGACAAATTAAACAA
GGAGCAGGGCCGCACCATTTTAATGGTCATTCATGATCTGAACCATGCCGCCCGTTTTTCCCATTACATGATCGCGCTGA
AAAAAGGGCGCGTCATCAAGGAAGGAACGGCGGAGGAAGTCATGACTCCCGGTATATTGGAAGACGTGTTTCAAATTGAC
GCACAGATTGTAAAAGATCCGCGCACGAACAAACCGGTCTGCTTAACCTACGATTTAATCCGGCATGAAAACGCAACGGT
AAGATGA

Protein sequence : 
MNSLSAEQLTVGYGDRLIAKELDIAIPKGKITTLIGPNGCGKSTVLKTMSRIMKPKSGAVYLNGQAIMQKSTKDIAKEMA
ILPQTPEAPSGLTVYELVSYGRFPHQSGMGRLSDKDRDMIKWALEETGMAEFYDRPIEALSGGQRQRVWIAMALAQETEL
LLLDEPTTYLDLAHQLEILQLLDKLNKEQGRTILMVIHDLNHAARFSHYMIALKKGRVIKEGTAEEVMTPGILEDVFQID
AQIVKDPRTNKPVCLTYDLIRHENATVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-48 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-50 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-47 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-47 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-45 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-46 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-46 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-46 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSO_003955 YP_007444169.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 2e-48 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSO_003955 YP_007444169.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 2e-48 46
KSO_003955 YP_007444169.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 1e-49 45