Gene Information

Name : smpB (KSO_003695)
Accession : YP_007444117.1
Strain : Bacillus amyloliquefaciens IT-45
Genome accession: NC_020272
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 700712 - 701182 bp
Length : 471 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGCCAAAAGGATCAGGCAAAGTATTATCGCAAAACAAAAAAGCAAACCATGATTACTTTATAGAAGAAACCTATGAAAC
AGGCATCGTGCTGCAGGGAACGGAGATTAAGTCCATCCGCGCCGGCCGCGTAAACATGAAGGATTCCTTTGCGAAAATCG
AGCGCGGCGAAGTGTTCCTCCACAACATGCACATCAGCCCGTACGAGCAGGGAAACCGCTATAACCACGACCCGCTCCGG
ACGAGAAAGCTTTTGATGCACCGGAAAGAAATCAATAAGCTGATCGGCCTGACGAAAGAGAAAGGCTATTCCCTCGTGCC
GCTGAAGCTGTACTTGAAAAACGGCTTCGCCAAAGTATTAATCGGCCTCGGAAAAGGGAAGAAAACATACGATAAACGTG
AAGATTTAAAACGAAAAGACGCCAAAAGAGAAATCGAAAGAGCGTTCAGAGACAGACAAAAAGGCTTCTGA

Protein sequence :
MPKGSGKVLSQNKKANHDYFIEETYETGIVLQGTEIKSIRAGRVNMKDSFAKIERGEVFLHNMHISPYEQGNRYNHDPLR
TRKLLMHRKEINKLIGLTKEKGYSLVPLKLYLKNGFAKVLIGLGKGKKTYDKREDLKRKDAKREIERAFRDRQKGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-44 63
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-33 47
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-27 42