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Name : lysS (KSO_018990) Accession : YP_007447159.1 Strain : Bacillus amyloliquefaciens IT-45 Genome accession: NC_020272 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3837661 - 3839160 bp Length : 1500 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGTCAAGAAGAGCAAAATCATGAGGAATTGAACGACCAGCTGCAAGTCAGACGAGATAAAATGAACCAGCTGAGAGA AAACGGCATTGACCCTTTCGGCGAACGTTTCGAGAGAACGCATCAATCTCAACAAATCATTGAAGCCTACCAGGAGCTTT CTAAAGAAGAACTGGAAGAAAAAGCGATCGAAGTGACCATTGCAGGCCGTATGATGACAAAGCGCGGAAAAGGGAAAGCC GGCTTTGCGCATCTGCAGGACTTAGAAGGTCAAATTCAAATTTACGTAAGAAAAGACAGTGTCGGCGAAGAACAATATGA AATCTTTAAATCTTCAGACCTCGGAGACGTTATCGGCATCACCGGGAAAGTTTTCAAAACAAACGTAGGCGAGCTTTCTG TCAAAGCGACATCTTTTGAACTGCTGACAAAAGCACTGCGTCCTCTTCCTGATAAATATCATGGGTTAAAAGATGTTGAA CAGCGTTACCGCCAGCGCTATCTCGATCTCATCGTAAACCCTGACAGCAAACAAACGTTTATCACACGCAGCAAAATCAT CCAAGCGATGAGAAGATACTTAGATGACCATGGATACTTAGAAGTTGAAACACCTACGATGCACAGCATACCGGGAGGAG CGTCTGCACGCCCGTTCATCACGCACCATAACGCGCTAGACATGCCTCTTTATATGCGTATTGCGATTGAACTGCACCTG AAACGCCTGATTGTCGGCGGATTGGAAAAAGTCTACGAAATCGGCCGCGTGTTCCGTAACGAAGGTGTTTCTACACGCCA TAACCCTGAATTCACGATGATCGAGCTGTATGAAGCGTACGCCGATTATAAAGATATTATGAGTCTTACGGAAAACCTCG TAGCACATATTGCGCAGGAAGTGCTTGGAAGCACCACAATCCAGTACGGCGAAGAGCAGATTGATCTGAAACCTGAGTGG AAACGACTCCACATGGTAGATGCGGTCAAAGAAGCGACAGGCGTAGATTTCTGGAATGAGATGACTGTTGAAGAAGCGCG CGGTCATGCAAAAGAGCATGGTATCGAGATCACAAACTCTATGACGGTGGGTCATATCATCAATGAATTCTTCGAACAAA AAATTGAAGAAACACTCATTCAGCCTACATTTATTTACGGCCACCCTGTAGAGATTTCTCCTCTTGCTAAGAAAAATCCG GAGGACCCTCGCTTTACAGACCGTTTTGAGCTGTTTATCGTCGGCCGTGAGCACGCTAATGCGTTTACGGAGCTGAATGA CCCTATTGACCAGAGGGAACGCTTTGAAGCGCAATTAAAAGAAAGAGAAGAAGGAAACGATGAAGCGCATATGATGGATG AAGACTTCGTTGAAGCTCTTGAATACGGCATGCCGCCGACCGGGGGATTGGGTATCGGTATCGACCGCCTTGTCATGCTG TTAACAAATGCTCCGTCTATCAGAGACGTTTTATTATTCCCTCAAATGAGACAACGCTAA Protein sequence : MSQEEQNHEELNDQLQVRRDKMNQLRENGIDPFGERFERTHQSQQIIEAYQELSKEELEEKAIEVTIAGRMMTKRGKGKA GFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDLGDVIGITGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE QRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHL KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQIDLKPEW KRLHMVDAVKEATGVDFWNEMTVEEARGHAKEHGIEITNSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVML LTNAPSIRDVLLFPQMRQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-128 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007447159.1 | lysyl-tRNA ligase | VFG1668 | Protein | 5e-128 | 53 |
