Gene Information

Name : KSO_009835 (KSO_009835)
Accession : YP_007445343.1
Strain : Bacillus amyloliquefaciens IT-45
Genome accession: NC_020272
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1881452 - 1882939 bp
Length : 1488 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGAGTTCTTTAACGATGCAGATCACAAAAAGGCTGGAAACATTTTTACAGGGTACGAAGAAACTTTATATTGACGGAAA
ATTTGTTCCGAGCGCTTCAGGATCAACATTTGTCACACCGAATCCGGCAACCGGAGAAACGCTGATGACGCTTTACGAGG
CACAGACAGAAGACATTGACAGTGCAGTGAAAGCGGCACGCAAAGCCTTTGATCACGGCGAATGGCGCACTATGCCGGCC
GCTTCCAGAAGCAGGCTGATGTATAAGCTTGCCGATTTAATGGAAGAGCACAAAACGGAACTCGCGCAGCTTGAAACACT
TGATAACGGAAAACCGATTAATGAAACGACGAATGGGGATATCCCGCTCGCAATTGAGCATATGCGTTATTATGCCGGGT
GGTCTACAAAGATAACCGGACAAACGATTCCGGTCGCCGGCTCATATTTTAATTACACCCGCCATGAGCCTGTCGGCGTC
GTGGGGCAGATCATCCCTTGGAACTTTCCGCTCCTTATGGCGATGTGGAAAATGGGCGCCGCCCTTGCCACAGGCTGCAC
AATCGTTTTGAAACCGGCGGAGCAGACACCGCTGACCGCCCTCTATTTAGCGGAATTAATAGATCAGGCGGGCTTCCCTG
ACGGCGTCATCAATATTGTCCCAGGGTTCGGCGAGACGGCCGGGGAAGCGCTGACAAACCATGACGATGTCGATAAACTC
GCTTTTACCGGTTCTACAGAAATCGGCAAAAAAATCATGGAAAAAGCCGCAAAAAAAATTAAACGCGTGACACTGGAGCT
TGGCGGAAAGTCACCTAACATCATTTTGCCAGACGCCAATTTGAAGAAAGCCATTCCCGGCGCTTTAAACGGGGTCATGT
TTAATCAGGGGCAAGTATGCTGCGCAGGCTCCCGTGTCTTCATTCACAAAGACAAATATGATGAGGTCGTCAGCGAAATG
GTTTCATATGCGAAATCGCTTCAGCAAGGCGCCGGCCTTCACCAAGATACACAAATCGGCCCGCTCGTCAGCCAGGAACA
GCATGAGCGCGTGCTTTCATATATTGAAAAAGGAAAAGCGGAAGGAGCCAAAGCTGTCGCGGGCGGCAGCTGCCCGTTTG
AAGAAGGGTATTTTGTCTCCCCGACTGTATTTGCGGATGTGGATGACAGCATGACCATCGCAAAAGAAGAAATTTTCGGC
CCGGTCTTAGCCGCCATTCCGTATGATACGGTTGATGAAGTCATTGAACGGGCGAACCGCTCGGAATACGGTCTTGCAGC
CGGACTTTGGACTGAAAATGTGAAAAACGCTCATTACATTGCTGACCGTCTCCAAGCCGGCACCGTTTGGGTCAACTGCT
ACAATGTTTTCGATGCGGCATCTCCTTTCGGCGGCTATAAGCAATCCGGCCTCGGGCGGGAAATGGGCTCTTACGCGCTG
AATAATTATACAGAAGTGAAAAGCGTCTGGATCAACCTGGAAGATTAA

Protein sequence :
MSSLTMQITKRLETFLQGTKKLYIDGKFVPSASGSTFVTPNPATGETLMTLYEAQTEDIDSAVKAARKAFDHGEWRTMPA
ASRSRLMYKLADLMEEHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWSTKITGQTIPVAGSYFNYTRHEPVGV
VGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLTALYLAELIDQAGFPDGVINIVPGFGETAGEALTNHDDVDKL
AFTGSTEIGKKIMEKAAKKIKRVTLELGGKSPNIILPDANLKKAIPGALNGVMFNQGQVCCAGSRVFIHKDKYDEVVSEM
VSYAKSLQQGAGLHQDTQIGPLVSQEQHERVLSYIEKGKAEGAKAVAGGSCPFEEGYFVSPTVFADVDDSMTIAKEEIFG
PVLAAIPYDTVDEVIERANRSEYGLAAGLWTENVKNAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYAL
NNYTEVKSVWINLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-86 47
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-82 45
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-83 44
hpaE AAO17179.1 HpaE Not tested tcd island Protein 6e-70 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSO_009835 YP_007445343.1 aldehyde dehydrogenase VFG0082 Protein 1e-82 45