Gene Information

Name : KSO_005395 (KSO_005395)
Accession : YP_007444457.1
Strain : Bacillus amyloliquefaciens IT-45
Genome accession: NC_020272
Putative virulence/resistance : Resistance
Product : spermidine/putrescine import ATP-binding protein potA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1028615 - 1029370 bp
Length : 756 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGATGATTTTAGAAGCAGGCAATATCCAAAAAAGCTACGGAAACAAGCTGAATAAACAAGAGGTGCTGAAAGGAATTGA
TCTTCAGATTCACAAAGGGGAATTCGTCAGCATTATGGGCCCGTCAGGATCAGGGAAAACGACCCTTTTGAATGTGCTTT
CCTCCATTGATAAAGTGAGCGCGGGCACCATAAAACTGAATGAGACGGAGATTACATCCATGAAAGAAAAACAGCTTGCC
GAATTCAGAAAACGGCATCTCGGCTTTATTTTTCAGGATTATAATTTATTGGACACGCTGACCGTGAAGGAAAACATACT
CCTGCCGTTATCCATTACGAAAATGTCTAAGAAAGAGGCGGACCTGCGATTTGCCGAGACGGCAGAGGAGCTTGGGATCT
ATGATTTGAGACATAAGTATCCGAGTGAAATTTCCGGCGGACAAAAACAGCGGACGTCTGCCGCAAGAGCTGTTATTCAC
GAGCCGGGCATTATTTTTGCTGATGAGCCGACCGGAGCGCTCGATTCAAAGGCTGCCACGGATTTATTGAATAAACTCAG
CCGCCTGAATCAAAAACGCCGCGCCACCATTGTGATGGTGACGCATGATCCGGTTGCCGCCAGCTATTCCGGACGTGTGG
TTTTCATTAAAGACGGCCGTGTGTATACGCAGCTGAATAAAGGCGGTCAGGACAGACCGGACTTTTTTCAGGATATTATG
AAAACGCAAAGTGTATTGGGCGGGGTTCAGGCATGA

Protein sequence : 
MMILEAGNIQKSYGNKLNKQEVLKGIDLQIHKGEFVSIMGPSGSGKTTLLNVLSSIDKVSAGTIKLNETEITSMKEKQLA
EFRKRHLGFIFQDYNLLDTLTVKENILLPLSITKMSKKEADLRFAETAEELGIYDLRHKYPSEISGGQKQRTSAARAVIH
EPGIIFADEPTGALDSKAATDLLNKLSRLNQKRRATIVMVTHDPVAASYSGRVVFIKDGRVYTQLNKGGQDRPDFFQDIM
KTQSVLGGVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-37 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSO_005395 YP_007444457.1 spermidine/putrescine import ATP-binding protein potA NC_012469.1.7686878. Protein 6e-38 42
KSO_005395 YP_007444457.1 spermidine/putrescine import ATP-binding protein potA CP001581.1.gene598.p Protein 1e-37 41