Gene Information

Name : KSO_000510 (KSO_000510)
Accession : YP_007443492.1
Strain : Bacillus amyloliquefaciens IT-45
Genome accession: NC_020272
Putative virulence/resistance : Unknown
Product : rRNA large subunit methyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 92464 - 92943 bp
Length : 480 bp
Strand : +
Note : COG1576 Uncharacterized conserved protein

DNA sequence :
GTGAATATCAATATTGTGACCATCGGAAAACTAAAAGAAAAATACCTCAAGCAAGGCATTGAAGAATACAAAAAACGACT
CTCAGCCTACGCAAAAATCGACATCATCGAACTCCCGGACGAAAAAGCTCCGGAAAACCTGAGCGACCAAGACATGAAAA
TCGTCAAAAACAAAGAAGGCGAACGCATCCTGGCCAAAATCAGCCCGGACACCCACGTCATCGCCCTCGCCATCGAAGGA
AAAATGAAAACATCCGAAGAACTGGCCGATACAATAGATAAGCTGGCGACTTATGGAAAAAGCAAAATCACCTTCGTCAT
CGGCGGCTCACTCGGCCTAAGCGACGCCGTCATGAAACGGGCAGACGACAAACTGTCATTCTCAAAAATGACATTTCCTC
ATCAGCTCATGCGGCTTATTTTGGTGGAGCAGGTTTATCGGGCGTTTCGGATTAATCGTGGGGAGCCTTATCACAAATAG

Protein sequence :
MNINIVTIGKLKEKYLKQGIEEYKKRLSAYAKIDIIELPDEKAPENLSDQDMKIVKNKEGERILAKISPDTHVIALAIEG
KMKTSEELADTIDKLATYGKSKITFVIGGSLGLSDAVMKRADDKLSFSKMTFPHQLMRLILVEQVYRAFRINRGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 7e-47 64
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 5e-48 63
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 5e-48 63
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 5e-48 63
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 5e-48 63
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 5e-48 63
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 5e-48 63
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 5e-48 63
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 5e-48 63
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 8e-48 63
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 5e-48 63
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 8e-48 63
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 5e-48 63
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-48 63
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 3e-31 62
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 8e-48 62
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 8e-44 60
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 2e-46 60
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-46 60