Gene Information

Name : CSSP291_20768 (CSSP291_20768)
Accession : YP_007443021.1
Strain :
Genome accession: NC_020263
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47382 - 48665 bp
Length : 1284 bp
Strand : -
Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases

DNA sequence : 
ATGTTTCTGGCGGGTGCGATTTTCATCCTGACCCTGGTTCTGGTTATCTGGCAGCCGAAAGGGCTCAGCATCGGCTGGAG
CGCGTCGGCAGGCGCAGCACTCGCGCTACTCACCGGCGTGGTGCACCTCAGCGATATTCCGGTGGTGTGGAATATTGTCT
GGAACGCCACCGCGACGTTTATCGCTGTGATTATCATTAGCCTGCTGCTGGATGAGTGCGGTTTCTTCCGCTGGGCGGCG
CTGCACGTGGCACGCTGGGGCAACGGTAAAGGGGCCCGACTGTTTACCTGCATAATTTTACTGGGTGCGATGGTGGCGGC
GCTGTTTGCCAATGACGGCGCGGCGCTGATCCTCACACCGATTGTTATCGCAATGCTGCTGGCGCTCGGCTTCAGCCGCG
GGGCCACACTGGCGTTTGTCATGGCGGCAGGTTTTATCGCCGATACCGCCAGCCTGCCGTTGATGGTCTCGAATCTGGTG
AATATCGTGACCGCGGATTTTTTCTCGCTCGGCTTCAGCGATTACGCCGCTGTGATGGTGCCGGTAAACCTCGCCTCGGT
AGCGGCTTCACTGGTGATGCTGCACCTCTTTTTCCGCAAAGCAATTCCGGCGACATTCGATCGTGAAAAAATCAGCGCAC
CGCAGACGGCGATCCGCGATCGGCGCACCTTCATGACCGGCTGGCTGGTGCTGGTGTTGCTGCTGGTGGGGTTTTTCGCG
CTGGAGCCGCTCGGCGTGCCGGTGAGTCTGGTCGCCGCCGTGGCAGCGGCATTGCTCTGGCTGGTGGCACGCCAGGGACA
CGTTATCGATACGCGCAAAGTGCTGAAAGGCGCGCCGTGGCAAATCGTTATTTTTTCGCTGGGCATGTATCTCGTGGTGT
ATGGCCTGCGCAACGCCGGGCTGACCGGTCATCTCTCTACCCTGCTTAACGTCTTTGCACAACACGGGATCTGGAGCGCG
ACACTCGGTACGGGCGTTCTGACCGCCGCGCTCTCCTCGGTGATGAATAATATGCCAACGGTGCTGGTTGGCGCGCTCTC
CATCGACGGCAGCGCCGCCACGGGCCTCGTTAAGGACGCCATGATTTACGCGAATATCATCGGCTGCGATCTGGGCCCAA
AAATCACGCCAATCGGCAGCCTCGCCACGCTACTCTGGCTGCATGTGCTGGCGCAGAAAAATATTGCGATTAGCTGGGGG
TATTACTTCCGGGCAGGCATTGTGATGACCCTGCCGGTGCTGCTGGTAACGCTTACGGCTCTCGCCCTGCGTCTCTCTTT
TTAA

Protein sequence : 
MFLAGAIFILTLVLVIWQPKGLSIGWSASAGAALALLTGVVHLSDIPVVWNIVWNATATFIAVIIISLLLDECGFFRWAA
LHVARWGNGKGARLFTCIILLGAMVAALFANDGAALILTPIVIAMLLALGFSRGATLAFVMAAGFIADTASLPLMVSNLV
NIVTADFFSLGFSDYAAVMVPVNLASVAASLVMLHLFFRKAIPATFDREKISAPQTAIRDRRTFMTGWLVLVLLLVGFFA
LEPLGVPVSLVAAVAAALLWLVARQGHVIDTRKVLKGAPWQIVIFSLGMYLVVYGLRNAGLTGHLSTLLNVFAQHGIWSA
TLGTGVLTAALSSVMNNMPTVLVGALSIDGSAATGLVKDAMIYANIIGCDLGPKITPIGSLATLLWLHVLAQKNIAISWG
YYFRAGIVMTLPVLLVTLTALALRLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-132 78
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-96 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-93 56
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-95 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_20768 YP_007443021.1 arsenical pump membrane protein BAC0578 Protein 4e-133 79
CSSP291_20768 YP_007443021.1 arsenical pump membrane protein BAC0576 Protein 3e-132 79
CSSP291_20768 YP_007443021.1 arsenical pump membrane protein BAC0031 Protein 3e-130 78
CSSP291_20768 YP_007443021.1 arsenical pump membrane protein BAC0577 Protein 4e-127 77
CSSP291_20768 YP_007443021.1 arsenical pump membrane protein BAC0574 Protein 4e-96 57
CSSP291_20768 YP_007443021.1 arsenical pump membrane protein BAC0575 Protein 5e-96 56