Gene Information

Name : CSSP291_21033 (CSSP291_21033)
Accession : YP_007443070.1
Strain :
Genome accession: NC_020263
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 110618 - 111940 bp
Length : 1323 bp
Strand : +
Note : COG3486 Lysine/ornithine N-monooxygenase

DNA sequence :
ATGAAAACGTACGATTTCATCGGCATTGGCATCGGCCCGTTCAATCTCAGCATCGCCGCGCTCGCCGAAGGGCTTGACGG
CTTCAGCTCGCTGTTCCTTGAACGCAAACCGCACTTCTCCTGGCATCCGGGCATGATGGTGCCGGACTGCCATATGCAGA
CCAGTTTCCTCAAAGATCTGGTCAGCGCGGTGGAGCCAACCAACCGTTACAGTTTTCTGAACTACCTGGTACAGCGCAAA
AAGTTTTACCGTTTCCTGACTACCGAACAGCGCACGGTGTCCCGTGAAGAGTTCGCCGATTACCTCTGCTGGGCGGCAGA
TAACCTGAGCAATCTGTCGTTCAGTCAGCAGGTGCAGCAGGTGAGTTTTAACGAGGCCAGCGGGCTGTTTGAAGTGGTGA
CCCAGCGCGATCGTTTCTTCGCACGTCACGTCTGCATGGGCATCGGTAAACAGGTTAATCTGCCCGACTGCGTGCCGGCG
CAGAACGACCATTGCTTCCACGCCAGCGAAATGATGCTGCGCACGCCGTCGCTTGCCGGTAAGCGCGTCACGGTCGTCGG
CGGTGGCCAGAGCGGTGCCGATCTGTTCCTGAATATTTTCCGCGGCGAGTGGGGCCAGCCCGCGGCGCTGAACTGGGTGT
CGCGCCGCAACAACTACAACGCGCTCGATGAAGCCGCGTTCGCGAATGAATATTTCACGCCGGAATACCTTGAAAGCTTT
GCCACGCTCGATGAGAAAACGCGCTGCGATCTGCTCGCCGAACAGAAGATGACGTCTGACGGCGTGACCTGCGAATCGCT
GCTCGCTATCTATCGCGCCATGTACCATCGCTTTGAAGTGCTGCGCGAAAAACCCTGGGCGCATCTGCTGCCGTCGCGCT
CGGTCACCCGCGTGACGCCACAGGCGCAGGGCCAGCGTCTGTCGCTGCGCCATCATCTGGACGGCGGCCAGGAAACGCTG
GATACCGATGTGGTGATTTTCGCGACCGGCTATCGCCCTGCCCGTCCGGCGTTCCTCGCCCCGCTGGCGCATCGGCTGGA
GCTGGACGAACGCGAAGGCTTCCGGGTTAACACCGATTTCACGCTGGCGTGGAACGGCCCCGGCGCAAACCATCTTTTTG
CCGTCAATGCCGGAATGCACAGCCTCGGCATTGCGGAACCTCAGCTCAGCCTGATGGCCTGGCGGGCCGCGCGCATTCTC
AATGTCGCGCATCCTGACATGCCGTTTGAACTGAGCACCACCCCTGGCGTGATCCAGTGGCTTTCCCGGCCGGAAACGGT
CACCCGCCAGGTTTCTCAACCTGTAAACAGCACTGACTACTAA

Protein sequence :
MKTYDFIGIGIGPFNLSIAALAEGLDGFSSLFLERKPHFSWHPGMMVPDCHMQTSFLKDLVSAVEPTNRYSFLNYLVQRK
KFYRFLTTEQRTVSREEFADYLCWAADNLSNLSFSQQVQQVSFNEASGLFEVVTQRDRFFARHVCMGIGKQVNLPDCVPA
QNDHCFHASEMMLRTPSLAGKRVTVVGGGQSGADLFLNIFRGEWGQPAALNWVSRRNNYNALDEAAFANEYFTPEYLESF
ATLDEKTRCDLLAEQKMTSDGVTCESLLAIYRAMYHRFEVLREKPWAHLLPSRSVTRVTPQAQGQRLSLRHHLDGGQETL
DTDVVIFATGYRPARPAFLAPLAHRLELDEREGFRVNTDFTLAWNGPGANHLFAVNAGMHSLGIAEPQLSLMAWRAARIL
NVAHPDMPFELSTTPGVIQWLSRPETVTRQVSQPVNSTDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-122 60
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-124 60
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-124 60
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 2e-124 60
iucD AAD44749.1 IucD Virulence SHI-2 Protein 1e-124 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_21033 YP_007443070.1 hypothetical protein VFG1084 Protein 1e-122 60
CSSP291_21033 YP_007443070.1 hypothetical protein VFG0618 Protein 7e-125 60
CSSP291_21033 YP_007443070.1 hypothetical protein VFG0937 Protein 6e-125 60