Gene Information

Name : CSSP291_04275 (CSSP291_04275)
Accession : YP_007439741.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Virulence
Product : putative GTPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 897892 - 898776 bp
Length : 885 bp
Strand : -
Note : COG3596 Predicted GTPase

DNA sequence :
ATGAAATGCAATAAAGAATTAAATCAGCTGTATTCGCCACTTAGTCTGCTGCCCAGCAATGTTGCAGAGGAAGTCACTAA
ACGTCTGCACGACATTATTCATTACCAGCCCATCATCGGCATAATGGGAAAGACTGGTGCTGGGAAGTCGAGTTTGTGTA
ACGCACTGTTTCGCAGCACGGTCTCGGCCGTCAGTCATACCACTGCGTGTACCCGTGAGCCACAGCGTTTTACGCTGCAG
GCAGGTGAACGCCAGGTGACGCTGATTGATCTGCCCGGGGTGGGCGAAAGCCCGGAGCGGGATGAAGAGTATCAGGCACT
GTATCAACGTATCTGGCCGGAGCTGGACCTGGTGCTCTGGCTGATTAAAGCCGATGACCGGGCACTGACCCCCGACTGTG
ATTTTTATTTTCGGATGCTGTCACCAGGCAGTGCTGGGAGGGATAAGGTGCTGTTTGTCCTGACCCAAGCCGATAAAATC
GAGCCTTCCCGTGAATGGAGCGGCTTTCTTAATCAACCTTCAGAGCAACAGTTAAAACACCTGAAGGAAAAGCAGCGCGC
GGTGTGCTCGTTATTCAACCACCCGGCACTCCCGGTGATCACCGTATCAGCAGCCACTGGCTGGCATCTGCCTGAGCTGG
TGGAGGTGCTGTTTCGCTCACTGCCTGCCCGCGCCAGCAGTGCCGTCAGTTCGGTCATCAGACCACAATACCGCACGCAA
AAAATTGAGGCGCAGGCGCAACAGGATTTTGGCGATACGGTCAGCGACGTGATGACACACACCCTGTCGGAGCTGTCCCT
TCCCTCCGCAGTGAATGCGGTGGTCAGTACCGTGATTAGTGCGGTGGTCTCTGTTGCCCGCAGTGTCTGGCGGTTTTTCT
TCTGA

Protein sequence :
MKCNKELNQLYSPLSLLPSNVAEEVTKRLHDIIHYQPIIGIMGKTGAGKSSLCNALFRSTVSAVSHTTACTREPQRFTLQ
AGERQVTLIDLPGVGESPERDEEYQALYQRIWPELDLVLWLIKADDRALTPDCDFYFRMLSPGSAGRDKVLFVLTQADKI
EPSREWSGFLNQPSEQQLKHLKEKQRAVCSLFNHPALPVITVSAATGWHLPELVEVLFRSLPARASSAVSSVIRPQYRTQ
KIEAQAQQDFGDTVSDVMTHTLSELSLPSAVNAVVSTVISAVVSVARSVWRFFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08471.1 unknown Not tested SRL Protein 2e-49 47
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 9e-49 47
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 1e-49 47
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 3e-48 46
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-48 46
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 2e-48 46
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-46 46
unnamed AAL99256.1 unknown Not tested LEE Protein 1e-48 46
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-46 46
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 7e-49 46
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 7e-49 46
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 5e-49 46
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-47 45
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 6e-52 43
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-51 43
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 1e-51 43
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-51 43
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-51 43
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 1e-51 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_04275 YP_007439741.1 putative GTPase VFG1674 Protein 7e-50 47
CSSP291_04275 YP_007439741.1 putative GTPase VFG1062 Protein 1e-49 47
CSSP291_04275 YP_007439741.1 putative GTPase VFG0654 Protein 1e-48 46
CSSP291_04275 YP_007439741.1 putative GTPase VFG1522 Protein 3e-52 43
CSSP291_04275 YP_007439741.1 putative GTPase VFG1612 Protein 6e-52 43