Gene Information

Name : CSSP291_04270 (CSSP291_04270)
Accession : YP_007439740.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Virulence
Product : regulatory protein DeoR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 896894 - 897631 bp
Length : 738 bp
Strand : -
Note : COG2378 Predicted transcriptional regulator

DNA sequence :
ATGTCACAGACTGAGCACCGCTATGACCGACTGGCGGTCAGACTGTCTCTCATTATCAGTCGTCTGCTGGCAGGCGAAAC
ACTGAGCGTGAAGACACTGGCAGTCGAGTTTGGTGTCTCGGTACGCACCCTGCGCCGCGATTTTCGTGAGCGGCTGATAT
ATCTGAACCTTGAGTACCGTCATGGGCACTGCCGATTGTTGTCAGATCCCGGTATGGCACAGCGTGCCCCGGGAACCCTG
TGCTTTATGCGCAATGTTGGGCTTCAGCAGGTGTTTCCAGAAACGGACCTTCGCTTGGTAAACACGCTAACGGACAGTGA
GGATATCTCATCCTGTCTGGTCTGGCAGGAGGACGCCGAAAGCGCCCCCGTCCGCCCCGGTCTCTTTTCCCGACTGGTCG
ATACCATCATTCAGCAGCAGTGCATCCGGGAACTGGCTGACGGTGTGCGGGCTGAACACCTGGCACCGTACCGGCTTATT
TTCCTTGAGGGAGCGTTGTATCTGGTCGGTGAGCAGCACGGAAGGATCGTTGTTCTGCCGCTGTCCGGGATCACCGCCAT
CACCGTCCTGAGTGAGGGCTTCGAGCGTCGTGATACGGTATGTCAACTCACCCGTCAGGTGGCCTTCATCCGGGCGCTGC
CTCATTTCCCGGTCATGCACGACGTGATGGCTGCATCCCATTCTGCGCCACCTTTAACAGAGGAGAAGAGCCCTGCTGCA
ACTAACACGACGGGGTGA

Protein sequence :
MSQTEHRYDRLAVRLSLIISRLLAGETLSVKTLAVEFGVSVRTLRRDFRERLIYLNLEYRHGHCRLLSDPGMAQRAPGTL
CFMRNVGLQQVFPETDLRLVNTLTDSEDISSCLVWQEDAESAPVRPGLFSRLVDTIIQQQCIRELADGVRAEHLAPYRLI
FLEGALYLVGEQHGRIVVLPLSGITAITVLSEGFERRDTVCQLTRQVAFIRALPHFPVMHDVMAASHSAPPLTEEKSPAA
TNTTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 2e-42 43
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-42 43
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 4e-42 43
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 1e-42 43
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 8e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_04270 YP_007439740.1 regulatory protein DeoR VFG1523 Protein 3e-42 43
CSSP291_04270 YP_007439740.1 regulatory protein DeoR VFG1613 Protein 6e-43 43