Gene Information

Name : CSSP291_03880 (CSSP291_03880)
Accession : YP_007439663.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 820047 - 820832 bp
Length : 786 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGACTTCACGCTTAACCGGCGAAGCGCTGACGCTGGGTTACGGCGATTTTCGCGTCGCCGACGGGCTGAACGTGGCGAT
CCCCGATGGCAAATTTACCGCGATTATCGGCCCGAACGGCTGTGGCAAATCGACGCTGCTGCGCACGCTGAGCCGTCTGA
TGAAGCCGCTCGGCGGGCAGGTGCGCCTCGATGGCGAGGCTATTCAGCACTTCGCCACTAAAGAGGTGGCGCGGCGCATT
GGCCTGCTCGCGCAGAACGCCAGCGCGCCGGGGGATATCACCGTTGCGGAGCTGGTGGCGCGTGGGCGTTATCCGCATCA
GCCTTTGTTTACCCGCTGGCGCGACGAGGACGAGCGCGCGGTGCAAAAAGCGATGGCGGCGACCGGCGTGACCGCGCTTG
CCGACCAGAGTGTCGATACGCTCTCCGGCGGCCAGCGCCAGCGCGCCTGGATTGCGATGGTGCTGGCGCAGGAGACCTCG
ATTTTGCTGCTCGACGAGCCAACCACCTGGCTTGATATCAGCCATCAGATCGATCTGCTGGAACTGCTCTGCGCGCTTAA
CCGCGAGCAGGGGTATACGCTTGCCGCGGTGCTGCACGATTTGAACCAGGCGTGCCGCTACGCGAATCATCTGATTGCGT
TGCGGGACGGGAAGATTATCGCCGAAGGCGCGCCGTCAGAGATTGTGGACGCGGCGCTTATCGAGGCGATTTACGGGTTA
CGGTGCATGATTATTGAGGATCCGGTGGCGGGTACGCCGCTGGTGGTGCCGCTCGGGCGGCGGTGA

Protein sequence : 
MTSRLTGEALTLGYGDFRVADGLNVAIPDGKFTAIIGPNGCGKSTLLRTLSRLMKPLGGQVRLDGEAIQHFATKEVARRI
GLLAQNASAPGDITVAELVARGRYPHQPLFTRWRDEDERAVQKAMAATGVTALADQSVDTLSGGQRQRAWIAMVLAQETS
ILLLDEPTTWLDISHQIDLLELLCALNREQGYTLAAVLHDLNQACRYANHLIALRDGKIIAEGAPSEIVDAALIEAIYGL
RCMIIEDPVAGTPLVVPLGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-61 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-61 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-61 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-61 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-61 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-61 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-61 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-51 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_03880 YP_007439663.1 hypothetical protein BAC0164 Protein 4e-51 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_03880 YP_007439663.1 hypothetical protein VFG0925 Protein 3e-105 84
CSSP291_03880 YP_007439663.1 hypothetical protein VFG1042 Protein 4e-51 47