Gene Information

Name : CSSP291_03150 (CSSP291_03150)
Accession : YP_007439517.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 637345 - 638586 bp
Length : 1242 bp
Strand : -
Note : COG0582 Integrase

DNA sequence : 
ATGGCAAGAAAAACTAAGCCGTTAACCGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTGTATGA
CGGCGACGGGCTTACTCTGCTAATCAAGGCTAGTGGTAGTAAGCTCTGGCAGTTCCGTTATTATCGCCCTCTGACCAAGC
AGCGAACCAAACAGAGCTTCGGTGCCTACCCTGCAGTCTCACTTTCTGATGCACGTAAACTCAGAGCTGAATCTCGAGTT
TTGTTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGATGAGAAATTCTCAAGAGGCCAAAACCAACACTTT
CCTGTTAGTTGCTGAGCGTTGGTGGAATGTGAAGAAAGCCAGCGTAACAGAGGACTATGCCGACGACATCTGGCGTTCGC
TTGAGAGAGATGTTTTCCCAGCAATCGGTGATATCAGTGTCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTGCAG
CCGGTTCAGGCCAGAGGGGCATTAGAGACAGTTCGACGCCTTTGTCAGCGAATTAATGAAGTCATGATTTATGCGCAGAA
CACGGGCCTGATTGATGCGGTTCCCAGCGTAAACATCGGGAAAGCATTCGAGAAACCGCAAAAGAAAAACATGCCAAGCA
TCCGCCCGGATCAACTTCCACAGCTAATGCAGACTATGCGTACGGCTAGTATCAGCTTGTCTACAAGATGTCTGTTCATG
TGGCAACTTCTCACCATCACCCGCCCTGCCGAAGCTGCTGAAGCTCGATGGGATGAGATCGATTTTGATGTTAACGAATG
GAAAATTCCTGCAGCCCGAATGAAGATGAACCGGGACCATACAGTTCCATTATCCAATGAGGCTCTCTCTATTCTGGAAA
TGATGAAGTCACTCAGTGGTGGCCGGGAGTTTATCTTTCCCAGTCGGATTAAGCCTACACAGCCAATGAATAGCCAGACA
GTGAATGCAGCCCTTAAGCGTGCTGGTTTAGGAGGCGTTCTCGTATCACACGGTTTACGTTCTATCGCTAGTACGGCACT
CAATGAGGAAGGATTTCTGCCTGATGCCATTGAAGCAGCACTGGCTCATGTAGACAAAAATGAGGTACGTCGCGCTTACA
ACCGCAGCGACTATCTTGAGCAACGACGACCGATGATGCAGTGGTGGGCTGACTTCGTAAGCAAGGCCGACAGCGGGTGC
ATTGTTGAAAACGGAAAAAGAGAGTTAAAACTTGTGGGCTGA

Protein sequence : 
MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKASGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESRV
LLAKDIDPQEHQKEQMRNSQEAKTNTFLLVAERWWNVKKASVTEDYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQ
PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFM
WQLLTITRPAEAAEARWDEIDFDVNEWKIPAARMKMNRDHTVPLSNEALSILEMMKSLSGGREFIFPSRIKPTQPMNSQT
VNAALKRAGLGGVLVSHGLRSIASTALNEEGFLPDAIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFVSKADSGC
IVENGKRELKLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-107 53
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-107 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-107 53
int AAK20773.1 integrase Not tested VPI Protein 1e-107 53
int AAK20803.1 integrase Not tested VPI Protein 1e-107 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 6e-107 50
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-84 46
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-84 46
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-84 46
intA AAB00935.1 integrase A Not tested vap locus Protein 8e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_03150 YP_007439517.1 integrase VFG1092 Protein 1e-84 46