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Name : CSSP291_03040 (CSSP291_03040) Accession : YP_007439495.1 Strain : Cronobacter sakazakii Sp291 Genome accession: NC_020260 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 615375 - 618506 bp Length : 3132 bp Strand : + Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : ATGCTGAGTGAAGACGATCTAGAACAGCAATGCCTGAAATGGTTTGCTGAACAGGGCTGGGAAGTGCTGCACGGGCCCAA CATTGCGCCGGATGGCGATAACCCGCTACGTGCTTCATTTCATGATGTGTTTCTGCGCCCGGTGATGCTGGAACAGCTAC AAAGCATCAACCCCCATCTCCCTGTTGCCGTGCTGGAAGAGGTGATACTGCGTGTCGCCCATGCGCAAAGCCCGGATCTG GTCGTCAGCAACAAAGCGTTTCATCATTTGCTGCTTGATGGCGTGCCGGTTGAGTACAAGCGTGAGGATAAAGTCGTTCA TGATAAAGCGCTGCTGATGGATTTTAACCACCCAGCCAGTAACCGCTTTATGGTGGTCAACCAGGTTGCCATTCAGGGGA CAAAACAGGTACGGCGCCCGGATGTGATTGGCTATATCAACGGCCTGCCCGTGGCGGTAATCGAGCTGAAAAGCCCCATT GATGCCAATGCTGATATCTGGGCCGCATTTAACCAGTTGCAGACCTATAAAAACGAACTCAGCGATCTGTTTATCTGCAA CGAAGCGCTGGTGATAAGCGACGGGCAGAATGCACGCATTGGTTCCCTGACCGCAGATGAAGAACGTTTCCTGCCATGGA AAACCATTTCCAATGAAGACGATAAGCCACAATTTGACTGGCAGTTAAAAACCGTCGTTCAGGGCTTTTTTAATCGCGAG TTATTGCTCGACTATATTCGCTACTTTGTTCTGTTTGAAAATGATGGCAAACGACTCATCAAGAAAATAGCCGCTTATCA TCAGTTCCACGCCGTGCGTGAAGCCGTCGCAGCTACGATTGTGGCGTCTACTGGCAAACATCTGCCGCTGCGCAGTAACA TTACCCCCGGTAGCAAAAAAGCGGGGGTGGTGTGGCACACCCAGGGCTCCGGCAAAAGCATCTCCATGTGTTGCTATGCC GGGAAGCTGCTGCAACAGGCGGAGATGAACAACCCGACCATTGTGGTGGTAACCGACCGGAACGACCTCGACGGGCAGCT CTATGCCACTTTTTGTCAGGCGCAGGACTTACTTAAGCAGACGCCATTACAGGCCAATGACCGCGACGAATTGCGCGAGC TGCTGAATGCCCGCGAATCTGGCGGCATCATTTTTACCACCGTGCAGAAGTTTGCTCCGCGGGACAGTGAGCAGAGCCAT CCGGCTCTCAACACACGCAGCAACATCGTGGTCATTTCTGATGAAGCACATCGCAGCCAGTACGGCCTGAGCGCCACGCT GGACCGTGAAACCGGCCTTTATAAATATGGCTACGCAAAACATATGCGCGATGCGCTGCCGAATGCCTCGTTTATGGGGT TTACCGGAACGCCAATTGCCTCGGAAGATAAAGATACCCGTGCCGTATTTGGTGATTATGTCTCTATCTACGACATTCAG GATGCCGTGGATGATGGCGCTACGGTGCCTATCTACTATGAATCACGCCTGGCAAAACTCGACCTGAATCATGAGGAGCT CGAAGCGCTTTCGGAGCAGGTCGATGAGTTGGTAGAGGATGAAGAGACAGGGCAGCAAGAGAAAACGAAAGGCGACTGGA GCCGTCTGGAAAAGTTGGTAGGTTCAGCGCCGCGAATTCAGCAGGTCGCTGCTGACCTGGTTCAACATTTTGAAATGCGC AATGCAGCTATGACCGGCAAAGCGATGATTGTCGCCATGAGTCGCGATATTTGCGTCAAGCTTTATGATGCTATCGTGGC AATCCGCCCGGACTGGCACAGCGAGGATGTTGAAAAGGGCGCGATAAAAGTCATTATGACCGGCTCTGCATCGGATAATA ATGTTCTCCAGCCGCATATCTATAACAAACAGACCAAAAAGCGCCTTGAATCTCGCTTTAAAGATTTGAACGATCCGCTA AAGCTGGTGATTGTGCGTGATATGTGGTTGACCGGGTTTGATGCCCCTTGTTGTCACACCATGTATATCGACAAACCGAT GCGTGGACATAATTTAATGCAGGCGATTGCTCGTGTTAACCGCGTATTTAGGGATAAGCCTGGTGGACTGGTGGTGGACT ATATCGGCATTGCGAATGAGCTTAAGCAGGCGCTGAAAACTTATACAGATTCAAAAGGCAAAGGCCAGACGACTGTGGAT GCCAGAGAAGCGTTTGCGGTATTGCTGGAAAAATTCGATATCATCCATGGCATGTTTTCCCCCTCAGCAGGAAAACCAGG TTTTAAATACGAGGGCTTCTCTCGAGATCCTTTGGCCTTCTTGCGTGACGCTGTGAACTATATTTTGGGACTGGATGAAG GTAAAAAACGCTACCTCGATGTCTCGCTGGCAATGACTAAAGCATGGTCGCTTTGTAATACACTGGATGAAGCGAAACCA CTGCAAGAAGAGTTTGCCTTTCTTTCTGCAATCCGAGTGGCGCTTCTGAAACTAAATCCGGCAGCAAAGTTTAGCCAATC GGAGAAAAACTCCCTGTTAAGTAAAATTCTTGATAACGCCGTTGTCGCAACCGGTGTAGAGGATTTGTTTGCCTTGATCG GGTTAGATAAACCTAATATTGGCTTGTTGTCCGATGAGTTTCTGGAAGAGGTGCGGGAAATGCCGCAGCGAAACCTGGCG GTAGAACTTCTGGAAAAACTGCTTAATGACGGAATCCATGCCCGTTCCGGCAATAACGTCGTACAGCAGAAGAAGTATTC CGACCGTCTGAAAGCAGTATTGCTCAAATATAATAACCGCGCGATTGAAACGGCACAGGTGATTGAAGAGCTGATTGCGA TGGCAAAGTCATTTCAGGAGGCGATGGCGCGGGATGAGGCGCTGGGGCTCAACCCTGACGAAATTGCGTTTTATGATGCT CTGGCTGAAAACGAAAGTGCTGTACGGGAGCTTGGGGATGATGTCCTTAAGAAACTGGCCGTTGAAGTTACATTGAAATT ACGCCAGTCAACAACGGTGGACTGGCAAGTGCGTGAAAGCGTACGAGCCAGACTGCGTATCCTCGTTCGGCAAACGTTGC GTAAGTATAAGTATCCACCAGATAAAACTCTTCATGCTGTAGAGTTGATTCTCAAACAAGCTGAGGTCGTCTCTAACAGC TGGACGATTTAG Protein sequence : MLSEDDLEQQCLKWFAEQGWEVLHGPNIAPDGDNPLRASFHDVFLRPVMLEQLQSINPHLPVAVLEEVILRVAHAQSPDL VVSNKAFHHLLLDGVPVEYKREDKVVHDKALLMDFNHPASNRFMVVNQVAIQGTKQVRRPDVIGYINGLPVAVIELKSPI DANADIWAAFNQLQTYKNELSDLFICNEALVISDGQNARIGSLTADEERFLPWKTISNEDDKPQFDWQLKTVVQGFFNRE LLLDYIRYFVLFENDGKRLIKKIAAYHQFHAVREAVAATIVASTGKHLPLRSNITPGSKKAGVVWHTQGSGKSISMCCYA GKLLQQAEMNNPTIVVVTDRNDLDGQLYATFCQAQDLLKQTPLQANDRDELRELLNARESGGIIFTTVQKFAPRDSEQSH PALNTRSNIVVISDEAHRSQYGLSATLDRETGLYKYGYAKHMRDALPNASFMGFTGTPIASEDKDTRAVFGDYVSIYDIQ DAVDDGATVPIYYESRLAKLDLNHEELEALSEQVDELVEDEETGQQEKTKGDWSRLEKLVGSAPRIQQVAADLVQHFEMR NAAMTGKAMIVAMSRDICVKLYDAIVAIRPDWHSEDVEKGAIKVIMTGSASDNNVLQPHIYNKQTKKRLESRFKDLNDPL KLVIVRDMWLTGFDAPCCHTMYIDKPMRGHNLMQAIARVNRVFRDKPGGLVVDYIGIANELKQALKTYTDSKGKGQTTVD AREAFAVLLEKFDIIHGMFSPSAGKPGFKYEGFSRDPLAFLRDAVNYILGLDEGKKRYLDVSLAMTKAWSLCNTLDEAKP LQEEFAFLSAIRVALLKLNPAAKFSQSEKNSLLSKILDNAVVATGVEDLFALIGLDKPNIGLLSDEFLEEVREMPQRNLA VELLEKLLNDGIHARSGNNVVQQKKYSDRLKAVLLKYNNRAIETAQVIEELIAMAKSFQEAMARDEALGLNPDEIAFYDA LAENESAVRELGDDVLKKLAVEVTLKLRQSTTVDWQVRESVRARLRILVRQTLRKYKYPPDKTLHAVELILKQAEVVSNS WTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 85 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
