Gene Information

Name : xerD (CSSP291_02235)
Accession : YP_007439334.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 439094 - 439990 bp
Length : 897 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGGAACAGGATTTAGCCCGTATCGAACAATTTCTCGATGCGCTCTGGCTTGAGCGCAACCTGGCCGAGAACAGCCTGAG
CGCGTACCGGCGGGATCTCAGCATGGTCGTGGAGTGGTTGCACCATCGCGGGTTATCTCTGGCAACGGTACAGAGCGGCG
ATCTCCAGACGTTGCTGGCAGAGCGCGTTGAAGGCGGTTATAAGGCGACCAGCACTGCGCGTATGCTCAGTGCAGTACGT
CGGTTGTTTCAGCATCTCTACCGTGAAAAAATTCGCGATGACGATCCGAGCGCGTTGCTGGCGTCGCCTAAGCTGCCGCA
GCGTCTGCCAAAAGATTTAAGCGAAGCGCAGGTGGAAAGACTCCTTCAGGCGCCGACGGTCGAAGAGCCGATTGAACTGC
GTGATAAAGCCATGCTGGAAGTGCTTTATGCCACCGGTTTGCGCGTCTCTGAACTGGTCGGGTTGACCATGAGCGATGTG
AGCCTGCGCCAGGGTGTGGTACGCGTTATCGGTAAAGGCAATAAAGAGCGGCTGGTGCCGCTTGGCGAAGAGGCCGTTTA
CTGGCTTGAACAGTATCTCACGCACGGCCGCCCGTGGCTGCTTAACGGGCAATCGCTGGATATCCTCTTTCCAAGCAACC
GCGCCCGGCAGATGACCCGTCAGACCTTCTGGCATCGCATCAAACATTATGCTCAACTGGCGGGCATTGATAGTGAAAAG
CTTTCGCCGCACGTTCTACGCCATGCGTTCGCCACGCATCTGTTAAATCATGGTGCCGATTTGCGCGTGGTACAGATGCT
CTTAGGCCATAGCGATCTTTCCACCACGCAGATATATACACATGTGGCGACGGAACGGTTGCGGCAACTTCATCAACAGC
ACCACCCCAGAGCGTGA

Protein sequence :
MEQDLARIEQFLDALWLERNLAENSLSAYRRDLSMVVEWLHHRGLSLATVQSGDLQTLLAERVEGGYKATSTARMLSAVR
RLFQHLYREKIRDDDPSALLASPKLPQRLPKDLSEAQVERLLQAPTVEEPIELRDKAMLEVLYATGLRVSELVGLTMSDV
SLRQGVVRVIGKGNKERLVPLGEEAVYWLEQYLTHGRPWLLNGQSLDILFPSNRARQMTRQTFWHRIKHYAQLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-60 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-60 52