Gene Information

Name : CSSP291_19155 (CSSP291_19155)
Accession : YP_007442683.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein YedW
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4093768 - 4094448 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAACTGCTGCTGATTGAAGACAACGACAAAACCCGCGCGTGGCTCGAAAAAGGGCTGCGGGAGGCGGGGCTGGTGGT
GGACGCCGTCGCCGACGGGCGCGACGGCCTGCACCTGGCGCTGGAGCAAGACTACGCGCTGATTATCCTCGATATCATGC
TGCCGGGGCTCGACGGCTGGCAGGTGTTGCGCGCGCTGCGCACCGCCAAAGCCACGCCGGTGCTCTGCCTGACGGCCAGA
GATGCGGTAAGCGATCGCGTGAAAGGGCTGGAGCTGGGGGCCGATGATTATCTGGTGAAGCCCTTTTCCTTCGCCGAGCT
GCTGGCGCGCGTGCGGGCGCAACTGCGCCGCCATGCGCCTGCCGCCGCGACGCTACAGGTGGCGGATCTGACGCTTGATA
CCGCGCGCCACGCCGCCAGCCGCGGCAGCGAGCGGATCGCGCTGACCCGCCAGGAATTTACGCTGCTGTGGCTGCTGGCA
AGCCGCGTCGGGGAAATTTTACCGCGCACGCTGATCGCCAGCGAAGTCTGGGGGATTAACTTTGACAGCGAAACCAACGT
GGTGGATGTCGCCATTCGTCGCCTGCGCAAAAAAATCGACGATCCGTTCCCGCTCAAGCTGATAGAAACCGTGCGCGGCA
TGGGTTATCGCCTCAATGCACCGGAGCAGAGCGATGCGTAG

Protein sequence : 
MKLLLIEDNDKTRAWLEKGLREAGLVVDAVADGRDGLHLALEQDYALIILDIMLPGLDGWQVLRALRTAKATPVLCLTAR
DAVSDRVKGLELGADDYLVKPFSFAELLARVRAQLRRHAPAAATLQVADLTLDTARHAASRGSERIALTRQEFTLLWLLA
SRVGEILPRTLIASEVWGINFDSETNVVDVAIRRLRKKIDDPFPLKLIETVRGMGYRLNAPEQSDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-77 72
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-76 70

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW BAC0197 Protein 3e-61 61
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW BAC0083 Protein 8e-62 60
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW BAC0125 Protein 3e-62 60
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW BAC0111 Protein 2e-60 58
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW BAC0308 Protein 1e-55 57
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW BAC0638 Protein 1e-55 56
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW BAC0347 Protein 8e-55 54
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_003923.1003417.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_013450.8614146.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_002951.3238224.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_007793.3914065.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_002758.1121390.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_010079.5776364.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_002952.2859858.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW NC_007622.3794948.p0 Protein 1e-40 44
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW CP001918.1.gene5135. Protein 7e-24 43
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW AE015929.1.gene1106. Protein 6e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW VFG0596 Protein 3e-77 72
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW VFG1389 Protein 6e-34 45
CSSP291_19155 YP_007442683.1 transcriptional regulatory protein YedW VFG1390 Protein 4e-38 44