Gene Information

Name : CSSP291_16590 (CSSP291_16590)
Accession : YP_007442176.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3518153 - 3518815 bp
Length : 663 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAACTGCTGATAGTCGAAGATGATCTGCTGTTACAGGAAGGACTGGCGCTGGCGCTCGGCAACGAGGGCTATGCGCT
GGATTGCGCCGCGAATGCCGCTGAGGGCGACGCCCTGCTCCAGAGCGGCGAATACAGCCTGATTATTCTCGACTTAGGCT
TGCCGGATAAAGACGGCGCCACGCTGCTCAGCCAGTGGCGCCGGAGCGGTGTGACAACGCCAGTGCTTATTCTCACGGCG
CGTGACGCGCTGGCAGATCGCGTAAGCGGGCTTGATGCGGGTGCGGATGATTATCTGGTTAAACCCTTTGCGCTGGCGGA
GCTTCACGCCCGCGCGCGGGCGCTTATCCGCCGTTATCAGGGGCACAGCGATAATCTGTTGCAGCACGACGATATCACGC
TCAATCTGCAAACCCAGCAGGTACTGCTCCAGGGAATGCCTGTAGAAGTGACGCCCAAAGAGTTCGCGTTACTCACCCGC
CTGATGATGCGCATCGGCCAGACGGTGCACCGCGAAACCCTGCAACAGGACATCTACAGCTGGCAGGACGATCCCAGCTC
GAATACGCTTGAAGTGCACATCCACAATCTGCGCCGTAAGCTCGGTAAAACCCGCATTCGTACCATACGCGGCGTGGGAT
ACCGGCTGGAGCGGCCATTATGA

Protein sequence : 
MKLLIVEDDLLLQEGLALALGNEGYALDCAANAAEGDALLQSGEYSLIILDLGLPDKDGATLLSQWRRSGVTTPVLILTA
RDALADRVSGLDAGADDYLVKPFALAELHARARALIRRYQGHSDNLLQHDDITLNLQTQQVLLQGMPVEVTPKEFALLTR
LMMRIGQTVHRETLQQDIYSWQDDPSSNTLEVHIHNLRRKLGKTRIRTIRGVGYRLERPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-24 45
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_16590 YP_007442176.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 2e-46 69
CSSP291_16590 YP_007442176.1 DNA-binding transcriptional regulator BasR BAC0197 Protein 2e-19 44
CSSP291_16590 YP_007442176.1 DNA-binding transcriptional regulator BasR BAC0083 Protein 3e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_16590 YP_007442176.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 3e-39 57
CSSP291_16590 YP_007442176.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 3e-18 42