Gene Information

Name : CSSP291_15540 (CSSP291_15540)
Accession : YP_007441968.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein KpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3289874 - 3290539 bp
Length : 666 bp
Strand : -
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATTGCTATCGAAAATCTCACCAAATCGTACCGCACGCCCGCAGGGCGGCATTATGTCTTTAAGGATCTCTCTCTGAC
GCTGCCGTCCGGCAAGAGCGTGGCGCTGATAGGGCGTAACGGGGCGGGGAAATCGACGCTGCTGCGCATGATTGGCGGGA
CGGATAACCCGGACAGCGGGCGAATCATCTCCAGCGCCACGATCTCCTGGCCGGTCGGGCTGGCAGGGGGTTTTCAGGGC
AGTCTGACCGGGCGTGAAAATGTGAAATTTGTGGCGCGGCTTTACGCGCCTAAAGAAGAAGTCCGCCAAAAAGTCGCGTT
CGTTGAGGAATTCGCCGAGCTTGGAAAGTATTTTGACATGCCGGTGAAGGCCTATTCCTCTGGCATGAAAGCGCGTCTCG
GGTTTGGGCTGAGCATGGCGTTCAAATTCGACTACTACCTGGTGGACGAAGTCACCGCTGTTGGCGATGCAAGTTTTCGT
AAAAAATGCGAAACGCTGTTTGAAGCTCGCCATCAAGAGTCGTGCTTTTTAATGGTGTCGCACAATCTCCACTCACTCAA
ACAGTATTGCGATGCGGCGTTGTTTATAGGTAGAAACGGCCAGGTCATTTTTTTCGATGATGTAGACCAGGCAATAGATG
TGTATGTGAAAGAAGAAAATCTTTGA

Protein sequence : 
MIAIENLTKSYRTPAGRHYVFKDLSLTLPSGKSVALIGRNGAGKSTLLRMIGGTDNPDSGRIISSATISWPVGLAGGFQG
SLTGRENVKFVARLYAPKEEVRQKVAFVEEFAELGKYFDMPVKAYSSGMKARLGFGLSMAFKFDYYLVDEVTAVGDASFR
KKCETLFEARHQESCFLMVSHNLHSLKQYCDAALFIGRNGQVIFFDDVDQAIDVYVKEENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-75 72
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-75 67
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_15540 YP_007441968.1 polysialic acid transport ATP-binding protein KpsT VFG1449 Protein 6e-76 67
CSSP291_15540 YP_007441968.1 polysialic acid transport ATP-binding protein KpsT VFG0258 Protein 4e-46 47
CSSP291_15540 YP_007441968.1 polysialic acid transport ATP-binding protein KpsT VFG0696 Protein 4e-45 46
CSSP291_15540 YP_007441968.1 polysialic acid transport ATP-binding protein KpsT VFG2563 Protein 1e-41 42