Gene Information

Name : CSSP291_13825 (CSSP291_13825)
Accession : YP_007441633.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Virulence
Product : transcriptional regulator PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2902697 - 2903386 bp
Length : 690 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGGCGAGACGTATTCTGGTCGTTGAAGATGAAGCACCTATCCGCGAGATGGTGTGTTTCGTACTGGAACAAAACGGCTT
CCAGCCGGTGGAAGCGGAAGATTATGACAGTGCGGTGAATCAACTCAATGAGCCCTGGCCCGATCTGATTTTGCTGGACT
GGATGCTGCCCGGCGGATCGGGGATCCAGTTTATTAAACATATCAAACGCGAAGCGCTGACCCGTGAAATTCCGGTCGTC
ATGCTGACCGCGCGCGGCGAAGAAGAAGATCGCGTGCGTGGCCTGGAAACGGGGGCTGACGATTACATTACCAAACCGTT
CTCCCCGAAAGAGCTGGTGGCGCGTATTAAAGCGGTCATGCGCCGTATCTCGCCGATGGCCGTTGATGAAGTTATCGAAA
TGCAGGGCTTAAGCCTCGATCCGTCATCGCACCGCGTGATGACCGGCGAAAACCCCCTCGATATGGGGCCGACCGAATTC
AAGCTGTTACACTTCTTTATGACGCACCCGGAGCGCGTTTACAGCCGCGAACAGCTGTTGAATAACGTCTGGGGCACCAA
TGTGTATGTGGAAGATCGCACCGTGGATGTGCATATCCGCCGCCTGCGCAAGGCGCTAGAGCAGAGTGGTCATGACAGAA
TGGTTCAGACGGTGCGCGGTACGGGTTATCGGTTCTCAACCCGTTTTTAA

Protein sequence : 
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHIKREALTREIPVV
MLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVDEVIEMQGLSLDPSSHRVMTGENPLDMGPTEF
KLLHFFMTHPERVYSREQLLNNVWGTNVYVEDRTVDVHIRRLRKALEQSGHDRMVQTVRGTGYRFSTRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-35 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-35 41
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_13825 YP_007441633.1 transcriptional regulator PhoB HE999704.1.gene2815. Protein 7e-40 43
CSSP291_13825 YP_007441633.1 transcriptional regulator PhoB NC_003923.1003749.p0 Protein 4e-37 41
CSSP291_13825 YP_007441633.1 transcriptional regulator PhoB CP001918.1.gene5135. Protein 7e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_13825 YP_007441633.1 transcriptional regulator PhoB VFG1563 Protein 4e-35 41
CSSP291_13825 YP_007441633.1 transcriptional regulator PhoB VFG1702 Protein 3e-35 41