Gene Information

Name : ribD (CSSP291_13745)
Accession : YP_007441617.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 2882154 - 2883257 bp
Length : 1104 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGTCTGACGAATTTTACATGGCGCGCGCGCTTAAGCTCGCGGGCCAGGGACGTTTTACCACGCATCCGAATCCGCGTGT
GGGCTGCGTGATTGTTAAAGAGGGCGTAATCGTCGGCGAAGGCTTTCATCTGCGCGCTGGCGGGCCGCACGCCGAAGTGC
ATGCGCTGCGTATGGCGGGCGACAAGGCGCGCGGTGCTACCGCGTATGTCACGCTTGAACCCTGTAGCCACCACGGACGC
ACGCCGCCATGCTGCGATGCGCTGATTAACGCGGGCGTCGCGCGCGTTGTCGCGGCGATGCAGGATCCGAACCCACAGGT
GGCGGGCCGCGGTTTGTATCGTCTTCAGCAGGCGGGAATTGAGGTCAGCCACGGTTTGATGATGAGCGAGGCCGAAGCGC
TCAATAAAGGCTTTCTCAAGCGCATGCGCACCGGTTTTCCGTTTATTCAGCTCAAGCTCGGCGCGTCGCTTGACGGCCGC
ACGGCGATGGCGAGCGGCGAAAGTCAGTGGATAACCTCGCCGCAGGCCCGCCGCGACGTGCAGCGTCTGCGCGCTGAAAG
CCATGCTATCCTCACTACCAGCGCCACGGTGCTGGCCGACGATCCGTCAATGACCGTGCGCTGGGACGAACTCGGCGAAG
AAACGCAGGCGGTTTATCCGCGTGAAAACCTGCGCCAGCCGCTGCGGATCGTGCTCGACCGGCAGAATCAGGTCACGCCC
GCGCATAAGATTGTCAATCAGCCCGGCGAGACCTGGCTTGCCCGCGCCTGCCCGGACGACACCGTCTGGCCAGAGGGCGT
GGAACAACTGCCGACGCCAGTGCACAACGGCAAGCTCGATCTGGTATTGCTGATGATGCAGCTTGGCAAACGCCAGGTGA
ACAGTCTGTGGGTTGAAGCGGGCCCGCAGCTCGCCGGTGCGCTCCTGCAGGCGGGGCTGGTGGATGAGCTGATTGTTTAT
ATGGCGCCGAAACTGCTCGGCAGCGAGGCCCGCGGGCTATTCACGCTGCCAGGACTTGAGCGGCTCGCCGACGCGCCGCG
CCTGGAATTTCGCGACGCCGTTCAGGTCGGCCCCGATTTGCGCCTGCGCCTGACGCTCGCCTGA

Protein sequence :
MSDEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGGPHAEVHALRMAGDKARGATAYVTLEPCSHHGR
TPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGR
TAMASGESQWITSPQARRDVQRLRAESHAILTTSATVLADDPSMTVRWDELGEETQAVYPRENLRQPLRIVLDRQNQVTP
AHKIVNQPGETWLARACPDDTVWPEGVEQLPTPVHNGKLDLVLLMMQLGKRQVNSLWVEAGPQLAGALLQAGLVDELIVY
MAPKLLGSEARGLFTLPGLERLADAPRLEFRDAVQVGPDLRLRLTLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-49 48
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-49 48