Gene Information

Name : CSSP291_08665 (CSSP291_08665)
Accession : YP_007440617.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Resistance
Product : DNA-binding transcriptional activator MarA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1793120 - 1793494 bp
Length : 375 bp
Strand : -
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence : 
ATGTCCAGACGCAACAATGATGCCATTACTATTCATAGCATTTTGGACTGGATTGAAGATAACCTGGAATCCCCCCTTTC
CCTTGAGAAAGTGTCGGCGCGTTCGGGTTACTCGAAATGGCACCTGCAACGCATGTTCAAAAAAGAGACCGGTCACTCGC
TGGGCCAGTATATCCGCAACCGGAAACTGACCGAGATTGCCCTCAAACTCAAAGAGAGCGACGAACCGATTCTTTATCTG
GCCGAGCGCTATGGGTTTGAATCCCAGCAGACGCTGACCCGCACGTTTAAGAACTATTTCTCCGTGCCGCCGCATAAATA
TCGCGTGACGCGGATGCCGGGCGAAGGCAAGTACCTCCACCCGCTGAATCACTGA

Protein sequence : 
MSRRNNDAITIHSILDWIEDNLESPLSLEKVSARSGYSKWHLQRMFKKETGHSLGQYIRNRKLTEIALKLKESDEPILYL
AERYGFESQQTLTRTFKNYFSVPPHKYRVTRMPGEGKYLHPLNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 4e-21 45
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 4e-21 45
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 6e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP000647.1.gene1624. Protein 1e-51 90
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP001918.1.gene2033. Protein 4e-51 90
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA BAC0560 Protein 2e-51 90
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA NC_002695.1.917339.p Protein 2e-51 90
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP001138.1.gene1637. Protein 1e-50 89
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP000034.1.gene1596. Protein 2e-51 89
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP001138.1.gene612.p Protein 1e-22 47
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA NC_010558.1.6276025. Protein 2e-21 45
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA NC_002695.1.914293.p Protein 6e-20 42
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP001138.1.gene4488. Protein 2e-20 42
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP000034.1.gene4505. Protein 1e-19 42
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA BAC0371 Protein 6e-20 42
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP001918.1.gene327.p Protein 2e-19 41
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA CP000647.1.gene4499. Protein 3e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA VFG1038 Protein 2e-21 45
CSSP291_08665 YP_007440617.1 DNA-binding transcriptional activator MarA VFG0585 Protein 2e-20 42