Gene Information

Name : yfmF (C663_0773)
Accession : YP_007425950.1
Strain : Bacillus subtilis XF-1
Genome accession: NC_020244
Putative virulence/resistance : Virulence
Product : iron-dicitrate ABC transporter (ATP-binding protein)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 834204 - 835004 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence : 
ATGGGAAAACTGGCTGCAGACCAGCTCACTCTTTCATATGACAGTACAGTGATTATTGACGGAGTCGACTTAAAGATAGA
AGAAGGAAAAATCACTGCGCTCATCGGCGCTAATGGCTGCGGTAAATCAACAATCCTCAAATCGCTCGCCAGGCTGATGG
CTCCGAAAAGCGGTACAGTGCTACTAGAAGGAAAAGACATCCACCGCCAGCCATCAAAAGAAGTCGCAAAAAAACTGGCC
ATTCTTCCACAATCTCCTCAGGCTCCTGAAGGATTGACGGTAGAGGAATTATGCTATTTTGGCAGACATCCTCACAAAAA
GCTGTTATCCAAGCATACCCAAGAGGATCATGACATGGTAGAGTGGGCGCTGGAAGCAACGGGCATGATTGAACTGAAGG
ATCGGACACTTGATGCCCTCTCAGGCGGCCAAAGACAAAGAGCCTGGATTTCCATGGCACTTGCGCAAGGCACTGAGTTG
CTTTTGCTTGATGAGCCGACCACGTATTTAGACATCTCACACCAGATTGAAGTACTTGAACTGCTGAAAAAGCTGAACCG
CGACCATGGCCGCACCGTTGTCATGGTGCTCCATGATTTAAACCAAGCCGCTCAATATGCTGACTATCTAATCAGTGTGC
TGGACGGAAAAATATACAACGCCGGAACACCGGAAGATGTGTTCACCCAGCCATTTTTCCGTGAAGTCTTCGGCTTGGAA
TGCTGCATCATGAGAAGCCCGATCGACCAGAAGCCAATGTGCCTGCCGACGGGACTGTGTCCGAAATTACGGGCGAAATG
A

Protein sequence : 
MGKLAADQLTLSYDSTVIIDGVDLKIEEGKITALIGANGCGKSTILKSLARLMAPKSGTVLLEGKDIHRQPSKEVAKKLA
ILPQSPQAPEGLTVEELCYFGRHPHKKLLSKHTQEDHDMVEWALEATGMIELKDRTLDALSGGQRQRAWISMALAQGTEL
LLLDEPTTYLDISHQIEVLELLKKLNRDHGRTVVMVLHDLNQAAQYADYLISVLDGKIYNAGTPEDVFTQPFFREVFGLE
CCIMRSPIDQKPMCLPTGLCPKLRAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-54 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-60 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-50 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-50 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-50 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-50 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-56 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-56 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF YP_007425950.1 iron-dicitrate ABC transporter (ATP-binding protein) BAC0164 Protein 3e-54 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF YP_007425950.1 iron-dicitrate ABC transporter (ATP-binding protein) VFG1042 Protein 2e-54 48
yfmF YP_007425950.1 iron-dicitrate ABC transporter (ATP-binding protein) VFG0925 Protein 2e-59 48