Gene Information

Name : ydfA (C663_0508)
Accession : YP_007425696.1
Strain : Bacillus subtilis XF-1
Genome accession: NC_020244
Putative virulence/resistance : Resistance
Product : putative metal-anion antiporter protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 558563 - 559726 bp
Length : 1164 bp
Strand : +
Note : -

DNA sequence :
GTGTTAACTGTGACAGGGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCATACTGATATCGTTAATTCTTGATAA
TATCGGTTTCTTTGAATGGGCAGCGCTTCATATGGCGAAGGCTGCAAAAGGAAACGGTGTGCGGATGTTCGTTTATGTAT
CTCTATTAGGAGCTATTGTCGCCGCGTTATTTGCAAATGACGGTGCAGCTCTTATATTGACACCAATCGTATTAGCGATG
GTCAGAGCATTACATTTTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCGGATACCACTTCGCT
TCCTTTAGTAGTGAGCAATTTGGTCAACATTGTTTCAGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAA
TGGTTGTCCCGTACTTGTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTCTTTAGAAAAAGCATACCAAAACGC
TATGATCTGACTGAGGTTAAAAAACCTGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCTTAGG
GCTGCTGTTAATTGGATATTTTGCAAGTGAATTTTTTTCTATCCCTGTATCAGTGGTAGCGGGTAGCATTGCGGTCATTT
TCTTAATCGCTGCGCAAAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGGCTATCGTATTCTTT
TCAATTGGCATGTATGTTGTTGTGTATGGTGTCCGAAATGCTGGATTGACAGATGTCCTTTCAGATGTGATTCAAGCCGC
AGCTGATCAAGGATTGTTTGCAGGTACGATTGGAATGGGCTTTATCGCGGCAATTCTTTCTTCCATTATGAATAACCTGC
CGACTGTCATGATTGATGCACTGGCTATTGCCGGTACAGATACACATGGGATGATGAGAGAAGCGCTCATATATGCAAAT
GTCATCGGTTCAGATTTAGGACCTAAAATAACACCGATTGGTTCCTTGGCGACATTATTATGGCTTCATGTTCTTTCGCA
CAAAGGTATGAAAATTTCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTTATTGATCACACTTG
TCGGCCTGTATATTTGGCTGCTGATAATCCATTCTTGTTTCTAA

Protein sequence :
MLTVTGIVWNATLAFVAIILISLILDNIGFFEWAALHMAKAAKGNGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAM
VRALHFNEKLVFPFIIASGFIADTTSLPLVVSNLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPKR
YDLTEVKKPVEAIKDQNMFRLSWYILGLLLIGYFASEFFSIPVSVVAGSIAVIFLIAAQKSPAVHTKKVVKEAPWAIVFF
SIGMYVVVYGVRNAGLTDVLSDVIQAAADQGLFAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALIYAN
VIGSDLGPKITPIGSLATLLWLHVLSHKGMKISWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-121 70
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 9e-117 69
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-122 68
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-100 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ydfA YP_007425696.1 putative metal-anion antiporter protein BAC0574 Protein 2e-119 70
ydfA YP_007425696.1 putative metal-anion antiporter protein BAC0575 Protein 2e-122 69
ydfA YP_007425696.1 putative metal-anion antiporter protein BAC0578 Protein 8e-99 60
ydfA YP_007425696.1 putative metal-anion antiporter protein BAC0031 Protein 6e-96 60
ydfA YP_007425696.1 putative metal-anion antiporter protein BAC0576 Protein 2e-98 60
ydfA YP_007425696.1 putative metal-anion antiporter protein BAC0577 Protein 2e-97 59