Gene Information

Name : ydeM (C663_0499)
Accession : YP_007425687.1
Strain : Bacillus subtilis XF-1
Genome accession: NC_020244
Putative virulence/resistance : Unknown
Product : putative dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 551327 - 551773 bp
Length : 447 bp
Strand : +
Note : -

DNA sequence :
TTGAAAAACAGAGGTGTAAGAATGAAGTTAGATGAGTTTACAATTGGCCAGGTCTTCAAAACGAAATCATTAAAAGTATC
AAAAGATGATATTATGCGGTTTGCGGGTGAATTTGACCCTCAGTATATGCATGTAGATGAAGAAAAAGCGAGTAAAGGCA
GATTTAATGGAATTATCGCTTCCGGCATACAAACACTGGCCATATCTTTTAAACTTTGGATTGAAGAAGGTTTCTATGGA
GACGATATTATAGCCGGAACAGAGATGAATCATATGACATTCATAAAACCCGTATATCCGGATGATGAATTGTTTACAAT
TGTTGAGGTTCTTGATAAGCAGCCAAAGAGAAATGAATTGGGAATACTCACTGTATTGCTATCTACTTATAATCAAAAAG
AAGTAAAAGTGTTTGAAGGTGAGTTATCCGTATTGATCAAACGATAA

Protein sequence :
MKNRGVRMKLDEFTIGQVFKTKSLKVSKDDIMRFAGEFDPQYMHVDEEKASKGRFNGIIASGIQTLAISFKLWIEEGFYG
DDIIAGTEMNHMTFIKPVYPDDELFTIVEVLDKQPKRNELGILTVLLSTYNQKEVKVFEGELSVLIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2522 YP_190063.1 acyl dehydratase MaoC Not tested Type-II SCCmec Protein 1e-40 56
maoC YP_184943.1 MaoC domain-containing protein Not tested Type-I SCCmec Protein 1e-40 56
unnamed BAD24825.1 conserved hypothetical protein Not tested Type-V SCCmec Protein 8e-41 56
SH0090 YP_252005.1 hypothetical protein Not tested SCCmec Protein 1e-40 56
SAR0038 YP_039514.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-40 56
unnamed ACL99837.1 hypothetical protein Not tested Type-V SCCmec Protein 8e-41 56
unnamed BAA94333.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-40 56
SAMSHR1132_00310 YP_005324555.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-40 56
unnamed BAG06198.1 MaoC domain protein dehydratase Not tested Type-VII SCCmec Protein 8e-41 56
unnamed BAB47625.1 hypothetical protein Not tested Type-III SCCmec Protein 8e-41 56
MW0030 NP_644845.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-40 56
unnamed BAC57477.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 8e-41 56
SAV0040 NP_370564.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-40 56
unnamed BAB72114.1 hypothetical protein Not tested Type-IVa SCCmec Protein 8e-41 56
SA0037 NP_373277.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-40 56
unnamed BAB72133.1 hypothetical protein Not tested Type-IVb SCCmec Protein 8e-41 56
SAPIG0041 YP_005732851.1 MaoC like domain, putative Not tested Type-V SCCmec Protein 1e-40 56
SAUSA300_0031 YP_492751.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-40 56
unnamed BAA82222.2 - Not tested Type-II SCCmec Protein 8e-41 56