Gene Information

Name : gabD (C663_0384)
Accession : YP_007425578.1
Strain : Bacillus subtilis XF-1
Genome accession: NC_020244
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.16
Position : 436265 - 437653 bp
Length : 1389 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGATCAATTAACGGTCTACAACCCGGCTACGGGCGAGGAGATCAAAACGATTCCTCAGCAATCAGCCACAGAGGT
AGAAGAAGCCATTGAACGTTCACATCAAGCGTTTAAAACGTGGTCTAAAACATCAGCGAACGAAAGAGCGTCTCTTTTGA
AAAAATGGTATGAGCTGATTGTTGAACATAAAGAAGAGCTTGCAGATTTAATTACAAAGGAAAACGGAAAACCATACCAG
GAAGCAGTCGGCGAGGTACTTTACGGCGCAGGCTATATCGAATGGTTCGCAGAGGAAGCGAAGCGTGTGTACGGAAGAAC
GGTCCCGGCCCCGACAACTGGTAAACGAATTGTTGTCACACGCCAGCCGGTCGGCCCCGTTGCTGCTATCACGCCCTGGA
ATTTCCCGAATGCGATGATTACACGCAAAGCGGCGCCTGCTCTTGCCGCTGGCTGTACATTTATCATCAAGCCGGCGCCA
GACACACCGCTGTCTGCTTATGAACTAGCGCGCCTCGCATATGAAGCTGGCATTCCGAAGGATGTTCTTCAGGTTGTGAT
CGGTGATGGAGAAGAAATCGGAAATGTGTTCACAAGCAGTCCGAAAATCCGCAAAATCACGTTTACAGGCTCAACACCTG
TAGGGAAAATCCTTATGAAAAACAGCGCGGACACCGTGAAGCACGTCTCAATGGAACTCGGCGGACATGCCCCGCTGATC
GTAGATGAAGATGCAGACATTGACCTTGCCGTTGAACAGGCGATGGCGTCCAAATACCGAAACGCCGGCCAAACCTGCGT
ATGTGCCAACCGCCTGATCGTTCATGAGTCCATCAAGGATGAATTTGCTGCGAAACTGAGCGAGCAAGTGTCTAAGCTGA
AAGTCGGAAATGGACTTGAGGAAGGCGTCAATGTCGGACCGATCATCAACAAACGAGGCTTCGAAAAAATCGTCAGCCAA
ATAGATGATGCGGTTGAAAAAGGCGCAAAAGTGATTGCTGGGGGCACATATGACCGAAACGATGACAAAGGGTGCTACTT
TGTGAATCCGACAGTGCTCACCGATGTCGATACGTCCATGAACATCATGCATGAGGAAACATTCGGCCCGGTCGCCCCGA
TCGTCACGTTTTCTGATATTGATGAAGCGATTCAGCTTGCCAACGATACACCGTATGGCTTGGCTGCATACTTCTTCACA
GAAAACTACCGCCGCGGCATCTATATTTCCGAGAATCTAGAGTATGGCATTATCGGCTGGAATGACGGCGGACCGTCAGC
GGTTCAAGCGCCATTCGGCGGAATGAAAGAAAGCGGCATTGGCCGTGAAGGCGGTTCAGAAGGTATCGAGCCGTACCTTG
AAACAAAATATTTGTCCATCGGTTTATAA

Protein sequence :
MPDQLTVYNPATGEEIKTIPQQSATEVEEAIERSHQAFKTWSKTSANERASLLKKWYELIVEHKEELADLITKENGKPYQ
EAVGEVLYGAGYIEWFAEEAKRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKPAP
DTPLSAYELARLAYEAGIPKDVLQVVIGDGEEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLI
VDEDADIDLAVEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLKVGNGLEEGVNVGPIINKRGFEKIVSQ
IDDAVEKGAKVIAGGTYDRNDDKGCYFVNPTVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFT
ENYRRGIYISENLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGSEGIEPYLETKYLSIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-108 54
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 1e-73 42