Gene Information

Name : HD73_5449 (HD73_5449)
Accession : YP_007424547.1
Strain : Bacillus cereus HD73
Genome accession: NC_020238
Putative virulence/resistance : Virulence
Product : Alveolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5205443 - 5206981 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence : 
GTGATTTTTCTGAATATTAAGAAAAACACTAAAAGAAGAAAGTTCCTTGCATGTTTATTAGTTAGTTTATGCACTATTAA
TTATTCATCTATTTCCTTCGCAGAAACACAAGCAAGTAATGCAACTGATGTAACCAAAAATGCTAGTGGCATTGATACTG
GTATAGCAAATCTTAAATATAATAATCAAGAGGTTTTAGCTGTAAATGGTGATAAAGTAGAAAGTTTTGTTCCGAAAGAA
AGTATCAATTCAAATGGTAAATTTGTAGTAGTGGAACGCGAGAAAAAATCACTTACAACGTCACCAGTCGATATTTCAAT
TATTGATTCTGTAGTGAATCGCACGTATCCAGGAGCTGTACAACTTGCAAATAAAGCTTTTGCAGACAATCAACCAAGTT
TATTAGTGGCTAAGAGAAAGCCTTTGAATATTAGTATAGACTTACCGGGCATGAGAAAAGAAAATACAATCACTGTCCAA
AATCCGACATATGGTAATGTAGCTGGAGCAGTAGACGATTTAGTATCTACTTGGAATGAAAAGTATTCTACAACACATAC
GTTACCTGCAAGAATGCAGTATACGGAATCTATGGTTTATAGTAAATCACAAATAGCAAGTGCTCTTAATGTTAACGCTA
AATATCTTGATAACAGTCTAAACATTGATTTTAATGCGGTTGCAAATGGAGAGAAAAAAGTGATGGTAGCGGCGTATAAG
CAAATATTTTATACGGTAAGTGCTGAACTACCTAACAATCCATCCGACCTTTTTGATAATAGCGTTACTTTTGACGAGTT
AACTCGAAAAGGCGTAAGTAATTCGGCTCCACCTGTTATGGTTTCAAATGTAGCTTATGGTAGAACGATTTATGTAAAAT
TAGAAACAACATCTAAGAGCAAAGATGTACAAGCTGCTTTTAAAGCCTTACTTAAGAATAACAGCGTTGAAACAAGTGGA
CAGTATAAAGATATTTTTGAAGAAAGTACCTTTACTGCTGTAGTATTAGGCGGAGATGCGAAAGAGCATAACAAGGTTGT
TACTAAAGATTTCAATGAAATCCGAAATATCATTAAAGATAATGCTGAATTAAGTCTTAAAAATCCAGCATACCCAATTT
CATATACAAGCACTTTCTTAAAAGATAATTCAACTGCTGCTGTTCATAACAATACAGATTATATTGAGACGACAACTACA
GAATATTCAAGTGCTAAAATGACACTTGATCATTACGGTGCTTACGTTGCTCAATTTGATGTATCTTGGGATGAATTCAC
ATTTGACCAAAAGGGTAACGAAGTACTAACACATAAAACGTGGGATGGTAGCGGAAAAGACAAAACGGCTCATTACTCTA
CAGTTATCCCACTCCCACCAAATTCAAAAAATATAAAAATTGTAGCAAGAGAATGTACAGGTCTTGCATGGGAATGGTGG
AGAACAATTATTAATGAACAAAATGTTCCATTAACAAATGAAATAAAAGTTTCAATTGGAGGAACAACATTATACCCAAC
AGCTAGTATTAGTCATTAA

Protein sequence : 
MIFLNIKKNTKRRKFLACLLVSLCTINYSSISFAETQASNATDVTKNASGIDTGIANLKYNNQEVLAVNGDKVESFVPKE
SINSNGKFVVVEREKKSLTTSPVDISIIDSVVNRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTITVQ
NPTYGNVAGAVDDLVSTWNEKYSTTHTLPARMQYTESMVYSKSQIASALNVNAKYLDNSLNIDFNAVANGEKKVMVAAYK
QIFYTVSAELPNNPSDLFDNSVTFDELTRKGVSNSAPPVMVSNVAYGRTIYVKLETTSKSKDVQAAFKALLKNNSVETSG
QYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSLKNPAYPISYTSTFLKDNSTAAVHNNTDYIETTTT
EYSSAKMTLDHYGAYVAQFDVSWDEFTFDQKGNEVLTHKTWDGSGKDKTAHYSTVIPLPPNSKNIKIVARECTGLAWEWW
RTIINEQNVPLTNEIKVSIGGTTLYPTASISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 3e-151 63
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 4e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HD73_5449 YP_007424547.1 Alveolysin VFG2275 Protein 2e-175 71
HD73_5449 YP_007424547.1 Alveolysin VFG0976 Protein 8e-152 64
HD73_5449 YP_007424547.1 Alveolysin VFG1363 Protein 2e-101 43
HD73_5449 YP_007424547.1 Alveolysin VFG0074 Protein 5e-101 43