Gene Information

Name : fepB (CU7111_0325)
Accession : YP_007416165.1
Strain : Corynebacterium urealyticum DSM 7111
Genome accession: NC_020230
Putative virulence/resistance : Virulence
Product : iron ABC transport system, permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 400247 - 401272 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGTGCGCACCAGCCGCCTACTGGGTCTGGGGGTACTACTCCTACTGGTCGTCAGTGGCACGATCTGCAGTTTCCT
GTACGGCGCCCGGTCCATCCCCACAGAGGACGTGTGGGCTGCACTTCGGGATCTCCCGGCTACCAGTGGCTCCCCGGAGG
AGGTTCCAGTCAACCAACGCGTGGTCGCCGAGCTGCGCCTGCCACGCACCATATTGGCCATTATCGTGGGCGCGGCACTA
GGCGTAGCCGGCGCCCTAATCCAGGGACATACCCGCAATCCCCTGGCGGATCCGGGGATCCTGGGAATCAGTTCCGGCGC
GGCACTGAGCGTGGTGGCCAGCTACGCCCTGTTGGGCATCAGCGCGCCATGGGCGACTGCGGTGGTTGCCTTCCTTGGTG
CAATCGCAGCCACGGCGCTGGTCTTCGGCCTAGCTTCCGCGGGCAGAGCCACGGTAAATCCCCTGACCCTCGTGCTGGGC
GGAGCCGCGCTGTCGGCAGTGCTAAGCGCCATCACGAGCGCCTTCGTTCTCACAAGTGAAAACAACCTGGATAGGATGCG
CTTCTGGACCGTCGGTTCCCTAGCGGGCCGGGATATGAACATCGCGCTCAGCGTCTTGCCGTTTGTGCTTCTGGGGCTGA
TCCTGGCCTTTGCCACGGGCCCGCAGCTGAACATCCTAAATCTGGGCGACGACGTGGCAGCTGGCCTAGGTATCAACACT
GCGGCCGCGCGACTAGGTGGCATGGGCATCATCGCACTGCTAGCAGGTGCAGCCACTGCCGCTGCAGGACCGCTGGGCTT
CATCGGCCTGGTGGTACCCCATATCGTCCGAGCCCTCACTGGCCCGGATTACAAGTGGATTCTGCCGTACTCCGCGCTGG
CCGGTGCAGCACTACTTCTTTACGCGGACGTGGTGGGGCGCCTCATCGCCCGGCCCGGCGAGCTCCAGGTGGGCATTGTG
CTGGCGTTCGTGGGTGCACCGTTCTTCATCGTCTTGATTTACCGAAAGAAGGTGGCGACGCTCTGA

Protein sequence : 
MSVRTSRLLGLGVLLLLVVSGTICSFLYGARSIPTEDVWAALRDLPATSGSPEEVPVNQRVVAELRLPRTILAIIVGAAL
GVAGALIQGHTRNPLADPGILGISSGAALSVVASYALLGISAPWATAVVAFLGAIAATALVFGLASAGRATVNPLTLVLG
GAALSAVLSAITSAFVLTSENNLDRMRFWTVGSLAGRDMNIALSVLPFVLLGLILAFATGPQLNILNLGDDVAAGLGINT
AAARLGGMGIIALLAGAATAAAGPLGFIGLVVPHIVRALTGPDYKWILPYSALAGAALLLYADVVGRLIARPGELQVGIV
LAFVGAPFFIVLIYRKKVATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-17 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-17 43
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-17 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-17 43
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 1e-21 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-21 42
fecD AAL08452.1 FecD Virulence SRL Protein 1e-09 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepB YP_007416165.1 iron ABC transport system, permease BAC0163 Protein 8e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepB YP_007416165.1 iron ABC transport system, permease VFG0926 Protein 3e-17 44
fepB YP_007416165.1 iron ABC transport system, permease VFG1043 Protein 7e-10 41