Gene Information

Name : srtB (CU7111_1828)
Accession : YP_007417662.1
Strain : Corynebacterium urealyticum DSM 7111
Genome accession: NC_020230
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase (surface protein transpeptidase)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2164041 - 2164979 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
GTGGATCACACCCCCAGCACCAGCGTGGAACCGAAGAAGGAACCCCGCCGTGCCAACAGCACCAAGACCAGCCCCGTGCT
GGCCGCGGTGCTCGTGATCCTCGGGGTGCTCGTGATGCTGTACCCGGTGACGTCCACCCTGTGGAATAACCACCTCGCCA
CGAAGGCCGCGCAGGAATACGCGAAACTCGAAAAGAACACCCCACAAGAGGTGAAGAACACCCAGTGGGAGCGCGCCCAC
GAATACAACGAGAACCGAACCACCGGCCCCATCCTCGACCCCTGGCTCGCCCGCTTCGATAAGAACAACCCGGACTACCA
GGAATACCTGGACCAACTCGACGCGAACGACGCGATGGCGCGCCTCATCTTCCCCAAGATCAAGGCAGACCTGCCGATCT
TCCACGGGACAGATAACGACACTTTGCAAAAGGGATTGGGCCACCTCTTCGGCTCCGACCTGCCAGTCGGCGGTAAGGGC
ACGCACTCGGTGATTACTGGCCACACGGGCCTGGCGAACTCCACCATGTTCGATCACCTCAACAAGGCGGAGAAGGGTGA
TGCCTTCTACGTCCAGGTCTCCGGCGAGAAGCTGAAGTACGTGGTCGACCAGATCAAGGTCGTGCTGCCCACCGAAACCG
AGGACCTTCGCCCGGAGCAGGGCAAGGACTACATCACCCTGATCACCTGCACCCCCTACGGGATCAACACGCACCGCCTG
CTGGTGCGCGGCCACCAGGTCCCGCTGGACGAATCGGATCACGAAATCTTCGACAAGAACCACGGTGCTGGGTGGCAGTG
GTGGATGTACGCGCTGCTCGCGGCAGCAGCTGTTGTTCTGCTCCTGCTGCTGCGGTGGCTACTAAAGCAAAAGCGGGATA
ACGAATCCCAGGAAACGACAGAAACGATGAATGACGAAGGGGCTGGCGCAGATGACTAG

Protein sequence :
MDHTPSTSVEPKKEPRRANSTKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKNTPQEVKNTQWERAH
EYNENRTTGPILDPWLARFDKNNPDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
THSVITGHTGLANSTMFDHLNKAEKGDAFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
LVRGHQVPLDESDHEIFDKNHGAGWQWWMYALLAAAAVVLLLLLRWLLKQKRDNESQETTETMNDEGAGADD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-119 94
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-79 58
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-67 57
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-60 57
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 7e-54 51
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-39 46
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-52 44
srtH YP_005126713.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-35 42