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Name : hsdR (zj316_0984) Accession : YP_007413669.1 Strain : Lactobacillus plantarum ZJ316 Genome accession: NC_020229 Putative virulence/resistance : Unknown Product : Type I restriction-modification system,restriction subunit Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 1037273 - 1040146 bp Length : 2874 bp Strand : + Note : - DNA sequence : ATGATGGCAAGTGGACATCAATCTGAGGCAGAATTAGAAAATCACCTCATTCGAAAGTTACAAAGCATTGGCTATCATTA CGTTGAAATTCCCGATGTTGAAACGCTAAACACACATTTTCGTGCGGTCTTGAGTGAACGTAATCAAGAACGTTTAAAGG GAACACCACTGAGTGACCGTGAATTTCAGGCCGTATTAAATGATTTGATTGGCGCTAAGACGCATTATCAAGTTGCCCAA ATTTTACGTGGTTCGGTTGTTCAGCCAACTGGGAAAATTAATATTAAACGTGATGATGATAGCAGCTTATACCTAGAAAT TTTTAATGGAAAACAATTTGATCAGAATATTTTTGAAGTTAGCCATCAAATGACGGTTGAAGGTCGTCATGAGAACCGCT ATGATGTGCTGATCTTGATCAACGGGATGCCAATTGCCCAAATTGAGTTGAAGCGGCAAGGGGTTGAATTTACTCAGGCT TTTAATCAAATTATTCGCTACCGAACTGAATCGTACGCACAAGCAAAACTCATGCGACTGGTTCAGGTATTTGTCATTTC CAATGGCAATGAAACGCGGTATTTTGCGAATGGCGATGGTGAGTTAAATTCAAACTTCATGTTCTACTGGACGGATGAAC ATAATAATTGGTTGAATGACTTGGACGCTTTTACGACCACTTTCTTGAGTAAACCACGGTTACATAGTTTAATCGCAAAA TATACGGTGTTCGATAGTGGTGACCATAAAATGTTATTAATGCGGCCTTATCAAATATATGCCACTGAGGCAATTATTAA GCAAGCTATCGATCACCCCCATGAAAATGGTTATGTGTGGCACACGACGGGTTCCGGTAAGACGATTACCTCCTTTAAGG CCAGTCAGTTGTTATTACAAGAAACTGATGCTGAAAAGGTTATCTTCATGATTGACCGTGCCGACTTGGATATTCAGACG GTAAAGAATTTTAGTGCCTATCTGCCTGAAACAACTGGGGGCCAGAGTCCCTTGGATCGGACTGACAATACTGCTGCATT AGTCAAGCAGCTGTCCTCTAATGATAATGGCTTAATCGTGACGACCATTCAGAAGATGAATAATGCGGTCTCTAATGATC GGTATAAAGATATTCTGACACCGTACCATGACCGCAAAGTGATCTTCATTGAAGATGAAAGCCATCGTAGCCAGATGGGC GAAATGCGAAAAAACGTGAATCATTGGTTTAAGAATGCCCAACACTTTGGGTTCACTGGAACCCCGATTTTTCAACAGAA TATGGGACCCGATGGGCGGACCACAAAAGATCTGTACGAGAATCAGTTGCATCAATACTTGATTCGTGATGCAGTTCGTG ATGGTAACGTGCTTGGTTTTTCGATTCAGTATCTGTCGACCTTTGAGGAGACTGATCATGACATTACAGACGAACAAGTA CCAGGAATTGATACGCAAGAGGTCTATGAGTCCGAGGAGCGATTGGCCAAGATTGTTGAGCATATCCTGTTGAACCATAG CCACATTACAAAGAATAAGCATTACAATGCAATCTTTACGGTAGCGAATACGCGCATGGCTTTAAAGTATTATCAGTTGT TTAGAAAGTTGGATCCTGATCATAATTTGAAGGTCACGACAATCTTTACGTGGGCTGCCAATGAGGACGACAACGAGGAA CACCAAAAACAGGATGATGTCACTTCACGGATGGGATTAGATCAAGTCGTGAAGGACTATAATCAAATGTACGGTACGGA TTTTTCAACGGATAAATTCAAAGATTATTTTGCGGATGTTTCTAAGCGGATGCGCGATCATAATGACCAAACGCTGACGG ATAATATTGATATTTTGATTGTTGTGAACATGTTCCTAACCGGGTTTGACTCCAAACGGTTGTCCACACTATACGTGGAT AAAAATTTGCAATGGCACGGTTTAATCCAAGCATTTTCTCGAACCAATCGTGTTGAGGGCAAACAAAAACCATTCGGAAA TATTATTGCTTATCGAAATATCAAAAATAAGACGGATGAGGCTGTAGCGTTGTTTTCAGACGGGGACAGTTCCGGCTTCT TAGCACCAGATTATGATGAATTAAAAGCTGAATTTACTGACAAGATTGGCCAATTACTGACGGTGACTCCAGATGTCCAG TCAGTGGACGACCTCTATAACCGAGGCGATGACGCACTATATGAGTTTGTGATGGCGTTTCGGGCGGTCCTCCGGGTATA TAATCGTATTCGCGTGTATGATGATTTTGAATGGGCGCAATATGAACCTGAATTTTCGGATCAGCTGATGGAAGCCTTTC GGGGCAAATATTTTACGGCTTATCAAACGATTTACCAACGTAAAACGCAGGAGCGCGTCTCAATATTAGATGACGTTGAC TTTGATATCAGTCTATTGGAGACTGATACCATCAATGTTGACTATATTGTGAACTTAATCTCAGGCATTGACTTAATGTC GTCGACCGAACGTAAGCAAGATATTCAGAAAATTGAACATTTGTTGGATAATGCGACCAATGACCAATTAAAGTCGAAGG TTGAATTGTTGGAACAATTTTTGAATGAAGTTTTGCCAACGCTCGATACAGACGATGATATCGGCATGTCGTTGAGTAAC TTTATGGCCGAGAGCCAGCGAGCTGCCATTAAGGGCTTTTCACAAGAACACCACCTTTCGGAAGACTTCGTTAACGAGCA GATTTCTGACTACAACTTCTACGGTAAGACCAAGGACAAAGAGATTATTGACAAGTTAAGTGCTAATGGGCTCGGCTTTC GAGAGAAACGGCAGGCCAAACGCGAGATTAAGGATTTTGTATCGACTATCGACCGAAAGTATTCACTAAGCTAG Protein sequence : MMASGHQSEAELENHLIRKLQSIGYHYVEIPDVETLNTHFRAVLSERNQERLKGTPLSDREFQAVLNDLIGAKTHYQVAQ ILRGSVVQPTGKINIKRDDDSSLYLEIFNGKQFDQNIFEVSHQMTVEGRHENRYDVLILINGMPIAQIELKRQGVEFTQA FNQIIRYRTESYAQAKLMRLVQVFVISNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLIAK YTVFDSGDHKMLLMRPYQIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLLLQETDAEKVIFMIDRADLDIQT VKNFSAYLPETTGGQSPLDRTDNTAALVKQLSSNDNGLIVTTIQKMNNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMG EMRKNVNHWFKNAQHFGFTGTPIFQQNMGPDGRTTKDLYENQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDITDEQV PGIDTQEVYESEERLAKIVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRKLDPDHNLKVTTIFTWAANEDDNEE HQKQDDVTSRMGLDQVVKDYNQMYGTDFSTDKFKDYFADVSKRMRDHNDQTLTDNIDILIVVNMFLTGFDSKRLSTLYVD KNLQWHGLIQAFSRTNRVEGKQKPFGNIIAYRNIKNKTDEAVALFSDGDSSGFLAPDYDELKAEFTDKIGQLLTVTPDVQ SVDDLYNRGDDALYEFVMAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFRGKYFTAYQTIYQRKTQERVSILDDVD FDISLLETDTINVDYIVNLISGIDLMSSTERKQDIQKIEHLLDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSN FMAESQRAAIKGFSQEHHLSEDFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRKYSLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0054 | YP_300144.1 | type I site-specific restriction-modification system restriction subunit | Not tested | SCC15305cap | Protein | 0.0 | 44 |
