Gene Information

Name : isp2 (zj316_0736)
Accession : YP_007413421.1
Strain : Lactobacillus plantarum ZJ316
Genome accession: NC_020229
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 779566 - 781335 bp
Length : 1770 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGATTATTATAACATGAATCAAACCACTTTGAGTATCGCCTTGGATTACCAACCAGAAGAGCATCATCCTGCTCG
TTACATCAACCAGCTTGTTGAGAGTTTAAAACTAAAATATGATTACCAGTTTGGCCGTCCGCGGGAATATAACCTCGGTG
CCATGTTAAAACTGGTCCTTTTAGCGTACAGCTATGGCATTTTCAGCAGTCGTAAAATTGAACAGTTTGCCCGTGAAAAC
AAGCCAGCTGGGTGGTTAATTGCCGACCAAATTCCGTCCTACCGGACGATTTGTCGCTTTAGAATTTCTGATGAACTGGC
CACTTTGACAACCGATAGCTTATCACAGCTAACCCAATATCTTCGTCAAAATGGCATGATTGATGATGTTTCATTTATTG
ATGGAACTAAGATCCTAGCCGACGCCAACAAGTATAGCTTTGTTTGGAAGAAGAATACGATACGATTTGACAAGATGAAT
CGCGAAAAACTCGTTGACCTGTTAGGCGAGCTTCATGAAGCTAAAATTGTCGGTGAAATTCCGGCAGGATCAGAGCTGAC
TCCCGAACTATTGGATATCATGATTAGCAAGGTTGAGGATCACTTAGTGGTCCTTAATGAAACCGTGGAAGCAACTAAGC
AGGTTTCCCCGAACCCAGCCAAACAGCAACGCCGGACTGTTAAATCACAAAAACGTAAGTTGGATAAACGACGTGATAAA
ATGCGTGAACACCAAGCACAGCAAGCAATCTATGGTCAGCGTAACAGCTACTCTAAGACGGATCACGATGCCACCTTTAT
GCGGGTCAAGGAAGATCCGATGCAAAACGGTCAATTAAAACCTGCCTACAACGTTCAAATCGCCACGAGTAATCAGTTCA
TTACGGGATATCGGCTTTTCCCAAATCCAACCGACACACGAACCTTACAACCGTTTATTGAACATTTAAAGGCCAACAAT
GTGTTAGGTCACACCATCGTTGCCGATGCCGGATACGGTTCCGAAAGTAATTATCGGTACTTGGAAGATGAATTCGGTCA
GCATACCGTTTTGATTCCCTACGGCACAATGCTTAAAGAGAATAGTCGAAAATGGCAAAGTGATGACCGTAAGGTTATGA
ACTGGGACTATCATGAAAAAGATGATTATTTTATCAATCCGCAAAACGTCCGGTTTAATTTTAATGCTTATCGTCAACGG
ACTGATAAGTATGGTTTTACCCGTGACTTTAAAGAATACATTGCCGAAAAGTATGATGAAAATCATCAACTAATTTCCGC
GGCACTAACACCAAAAGGATATCTTAAAAGGATTTCCGTGAACGAAAATTGGGAATATTTCAAATCGAAACAACGAGAAT
TACTTTCAGCTCCAGAAACTGGTCAGATCTACGCTCAACGTAAGATCGATGTTGAGCCAGTTTTTGGCAAGATGAAGGCT
TCTTTACATTTCAATCGATTCTCGGTGCGAGGTTTCGACAAGGTCACCAAGGAAGCCGGAATCGTAATACTGGCGTTAAA
CATTATGAAACTGGTCACGGTAGGGACCAACTTTAAAAATCAAAGGCGTAAGCGAATGGGACGAGAAACCAAAATTCGGT
TTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCGCTTAATTTAGATGGCCCATTAAACTTAATTAGG
CTAATGCACCCATTGGATCCCAAGGTGCTAAAACAGTTGGTTCTTCGGCTTGGGCTGCCTTTAAGTCATCGGACAAGAAT
TCCTTGTTAA

Protein sequence :
MQDYYNMNQTTLSIALDYQPEEHHPARYINQLVESLKLKYDYQFGRPREYNLGAMLKLVLLAYSYGIFSSRKIEQFAREN
KPAGWLIADQIPSYRTICRFRISDELATLTTDSLSQLTQYLRQNGMIDDVSFIDGTKILADANKYSFVWKKNTIRFDKMN
REKLVDLLGELHEAKIVGEIPAGSELTPELLDIMISKVEDHLVVLNETVEATKQVSPNPAKQQRRTVKSQKRKLDKRRDK
MREHQAQQAIYGQRNSYSKTDHDATFMRVKEDPMQNGQLKPAYNVQIATSNQFITGYRLFPNPTDTRTLQPFIEHLKANN
VLGHTIVADAGYGSESNYRYLEDEFGQHTVLIPYGTMLKENSRKWQSDDRKVMNWDYHEKDDYFINPQNVRFNFNAYRQR
TDKYGFTRDFKEYIAEKYDENHQLISAALTPKGYLKRISVNENWEYFKSKQRELLSAPETGQIYAQRKIDVEPVFGKMKA
SLHFNRFSVRGFDKVTKEAGIVILALNIMKLVTVGTNFKNQRRKRMGRETKIRFLVPFAYTEASYVTASLNLDGPLNLIR
LMHPLDPKVLKQLVLRLGLPLSHRTRIPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 3e-73 45
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 1e-74 45
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 1e-74 45
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-74 45
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 8e-75 45
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 5e-59 41
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 3e-70 41