|
Name : isp2 (zj316_2274) Accession : YP_007414959.1 Strain : Lactobacillus plantarum ZJ316 Genome accession: NC_020229 Putative virulence/resistance : Unknown Product : Transposase Function : - COG functional category : - COG ID : - EC number : - Position : 2311195 - 2312925 bp Length : 1731 bp Strand : + Note : - DNA sequence : ATGCAAGATTATTATAACATGAATCAAACCACTTTGAGTATCGCCTTGGATTACCAACCAGAAGAGCATCATTCTGCTCG TTACATCAACCAGCTTGTTGAGAGTTTAAAACTAAAATATGATTACCAGTTTGGCCGTCCGCGGGAATATAACCTCGGTG CCATGTTAAAACTGGTCCTTTTAGCGTACAGCTATGGCATTTTCAGCAGTCGTAAAATTGAACGGTTTGCCCGTGAAAAC AAGCCAGCTGGGTGGTTAATTGCCGACCAAATTCCGTCCTACCGGACGATTTGTCGCTTTAGAATTTCTGATGAACTGGC CACTTTGACAACCGATAGCTTATCACAGCTAACCCAATATCTTCGTCAAAATGGCATGATTGATGATGTTTCATTTATTG ATGGAACTAAGATCCTAGCCGACGCCAACAAGTATAGTTTTGTTTGGAAGAAGAATACGATACGATTTGACAAGATGAAT CGCGAGAAACTCGTTGACCTGTTAGGCGAGCTTCATGAAGCTAAAATTGTCGGTGAAATTCCGGCAGGATCAGAGCTGAC TCCCGAACTATTGGATATCATGATTAGCAAGGTTGAGGATCACTTAGTGGTCCTTAATGAAACCGTGGAAGCAACTAAGC AGGTTTCCCCGAACCCAGCCAAACAGCAACGCCGGACTGTTAAATCACAAAAACGTAAGTTGGATAAACGACGTGATAAA ATGCGTGAACACCAAGCACAGCAAGCAATCTATGGTCAGCGTAACAGCTACTCTAAGACGGATCACGATGCCACCTTTAT GCGGGTCAAGGAAGATCCGATGCAAAACGGTCAATTAAAACCTGCCTACAACGTTCAAATCGCCACGAGTAATCAGTTCA TTACGGGATATCGGCTTTTCCCAAATCCAACCGACACACGAACCTTACAACCGTTTATTGAACATTTAAAGGCCAACAAT GTGTTAGGTCACACCATCGTTGCCGATGCCGGATACGGTTCCGAAAGTAATTATCGGTACTTGGAAGATGAATTCGGTCA GCATACCGTTTTGATTCCCTACGGCACAATGCTTAAAGAGAATAGTCGAAAATGGCAAAGTGATGACCGTAAGGTTATGA ACTGGGACTATCATGAAAAAGATGATTATTTTATCAATCCGCAAAACGTCCGGTTTAATTTTAATGCTTATCGTCAACGG ACTGATAAGTATGGTTTTACCCGTGACTTTAAAGAATACATTGCCGAAAAGTATGATGAAAATCATCAACTAATTTCCGC GGCACTAACACCAAAAGGATATCTTAAAAGGATTTCCGTGAACGAAAATTGGGAATATTTCAAATCGAAACAACGAGAAT TACTTTCATCTCCAGAAACTGGTCAGATTTACGCTCAACGTAAGATCGATGTTGAGCCAGTTTTTGGCAAGATGAAGGCT TCTTTACATTTCAATCGATTCTCGGTGCGAGGTTTCGACAAGGTCACCAAGGAAGCCGGAATCGTAATACTGGCGTTAAA TATTATGAAACTGGTCACGGTAGGGACCAACTTTAAAAATCAAAGGCGTAAGCGAATGGGACGAGAAACCAAAATTCGGT TTCTCGTCCCATTCGCTTATACAGAGGCTAGTTATGTCACAGCCTCTACTCAACATTGCTATTTTTATTCGATAACACAT TCGGTTCGTGATTATTCAGTATCAGTCATGATTAAAACGTGCCAAGTTTAG Protein sequence : MQDYYNMNQTTLSIALDYQPEEHHSARYINQLVESLKLKYDYQFGRPREYNLGAMLKLVLLAYSYGIFSSRKIERFAREN KPAGWLIADQIPSYRTICRFRISDELATLTTDSLSQLTQYLRQNGMIDDVSFIDGTKILADANKYSFVWKKNTIRFDKMN REKLVDLLGELHEAKIVGEIPAGSELTPELLDIMISKVEDHLVVLNETVEATKQVSPNPAKQQRRTVKSQKRKLDKRRDK MREHQAQQAIYGQRNSYSKTDHDATFMRVKEDPMQNGQLKPAYNVQIATSNQFITGYRLFPNPTDTRTLQPFIEHLKANN VLGHTIVADAGYGSESNYRYLEDEFGQHTVLIPYGTMLKENSRKWQSDDRKVMNWDYHEKDDYFINPQNVRFNFNAYRQR TDKYGFTRDFKEYIAEKYDENHQLISAALTPKGYLKRISVNENWEYFKSKQRELLSSPETGQIYAQRKIDVEPVFGKMKA SLHFNRFSVRGFDKVTKEAGIVILALNIMKLVTVGTNFKNQRRKRMGRETKIRFLVPFAYTEASYVTASTQHCYFYSITH SVRDYSVSVMIKTCQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 2e-73 | 45 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 1e-74 | 45 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 1e-74 | 45 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 1e-74 | 45 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 7e-75 | 45 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 2e-59 | 41 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 3e-70 | 41 |
